Gene
Gene Model ID | pfu_aug1.0_17920.1_61758 |
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Locus | scaffold17920.1 : 1 ... 5897 : + |
To GenomeBrowser | scaffold17920.1:1..5897 |
Genes list of scaffold | scaffold17920.1 |
Synonym | NA |
Manual annotation
Study field | other |
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Gene name | alpha-amylase |
Description | GenBank: AAO17925.1 alpha-amylase [Patella vulgata] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_17920.1_61758.t1 | 1 | 1 | Alpha-amylase | 23 | 111 | 8.8e-08 | 31.8 | 1.1e-11 | 1.6e-07 | 31.0 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_17920.1_61758.t1 | gi|168830256|gb|ACA34372.1| | alpha-amylase [Mytilus edulis] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_17920.1_61758.t1 |
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Definition | - |
>pfu_aug1.0_17920.1_61758.t1 ctttccaggtgtaccgtttaggagggaacacttcaacgatcggaacaagtgcccctcccacgacggtaatgtcaataact acggtgacccaaacaacgtaagaaactgctttcttgttggtttaacagatcttaatcagaacgaggagtatgttcgtgac aagattgctggatattttgatcacatgatcgatttaggtgtggccggatttagagtagacgcagctaagcatatgtggcc aaacgatctgaaagctattcaggaacgggttaaaaatctacccgaaggaggaagaccattcttctaccatgaagttattg atcagaatgatggagccattcagaggggtcacggcgggggaggtaatctcatcacccataaacaaccacatgactaccga ttggctgttgctttcactttggcttataattatggattcacaagggtaatgagtagctatttctttcaaaatccggacca aggacctccatcaaacggagatggctcgacaaaggatgttcctattaatgcggatggatcatgcggaaatggatgggtct gtgaacacagatggaaatcaatcggaaacatggcggcttttagaaatgctgttgtagagactggggttctaaattggaga gaagataataataaggtatcattctcaagaggtgacataggcttctttgccatgagcaagaatggtcaaatggacgaagt tcttcaaaccggactcccacaaggtcaatattgtgaccttatatctgaatgtcaaaagacagttacagttggtgacgacg gaagagcacgtattgttataaacagtaatgaagatcccgtgctcgcacttttaataggtaaatactacgaaggttataac gcatggaagacaggagataattaccttgactggtatggtgcagagtccgggcaaagttcgtactacggacaaataccaag aggaacaccagcagtgaagactacaaatcaagttggacaagagggctattcaaatatgaacaagtacggcgatgattatt ggttgatcgatattgatatggactgttcaaaaactatgagcggatggtttgagtttaaggcagtaatcaattttaactgg gagcgtgatatgtttggtacgcagacatgtgatcaaggcccgtttccctcaaataaccactgggctagatgtggaatgaa aaacatattcaatttcaacagcttacaatgtgatataacgacaatcaatcaatag |
Protein
Protein ID | pfu_aug1.0_17920.1_61758.t1 |
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Definition | - |
>pfu_aug1.0_17920.1_61758.t1 FPGVPFRREHFNDRNKCPSHDGNVNNYGDPNNVRNCFLVGLTDLNQNEEYVRDKIAGYFDHMIDLGVAGFRVDAAKHMWP NDLKAIQERVKNLPEGGRPFFYHEVIDQNDGAIQRGHGGGGNLITHKQPHDYRLAVAFTLAYNYGFTRVMSSYFFQNPDQ GPPSNGDGSTKDVPINADGSCGNGWVCEHRWKSIGNMAAFRNAVVETGVLNWREDNNKVSFSRGDIGFFAMSKNGQMDEV LQTGLPQGQYCDLISECQKTVTVGDDGRARIVINSNEDPVLALLIGKYYEGYNAWKTGDNYLDWYGAESGQSSYYGQIPR GTPAVKTTNQVGQEGYSNMNKYGDDYWLIDIDMDCSKTMSGWFEFKAVINFNWERDMFGTQTCDQGPFPSNNHWARCGMK NIFNFNSLQCDITTINQ |