Gene
| Gene Model ID | pfu_aug1.0_179426.1_21388 |
|---|---|
| Locus | scaffold179426.1 : 59 ... 822 : - |
| To GenomeBrowser | scaffold179426.1:59..822 |
| Genes list of scaffold | scaffold179426.1 |
| Synonym | pfu_aug2.0_75.1_16859 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_179426.1_21388.t1 | 1 | 1 | TatD_DNase | 5 | 88 | 2.3e-15 | 56.5 | 3.2e-19 | 2.4e-15 | 56.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_179426.1_21388.t1 | gi|348510771|ref|XP_003442918.1| | PREDICTED: putative deoxyribonuclease TATDN3-like isoform X1 [Oreochromis niloticus] | 2.0e-33 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_179426.1_21388.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_179426.1_21388.t1 ttcagtagcaatggaaggtgtaaaagagggttattttttctcgattccaccgtctatcatacgatcagagcagatgaaac ttgtgaagcagttgccaatagaaaatattgtacttgaaacggacagccctggattaggtccagtgaaaggagagcggaat gaaccatcgaatatttcggtatcatgtgattatatagccaaagttaagggaatgaaagtagaagatgtgatgaaaataac tacaatgaacgctatcaagctttttcctaagctgaagtcgtttattaacatttga |
|
Protein
| Protein ID | pfu_aug1.0_179426.1_21388.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_179426.1_21388.t1 SVAMEGVKEGYFFSIPPSIIRSEQMKLVKQLPIENIVLETDSPGLGPVKGERNEPSNISVSCDYIAKVKGMKVEDVMKIT TMNAIKLFPKLKSFINI |
|