Gene
| Gene Model ID | pfu_aug1.0_1795.1_22759 |
|---|---|
| Locus | scaffold1795.1 : 2986 ... 17553 : + |
| To GenomeBrowser | scaffold1795.1:2986..17553 |
| Genes list of scaffold | scaffold1795.1 |
| Synonym | pfu_aug2.0_3557.1_25787 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1795.1_22759.t1 | 6 | 1 | Arm | 247 | 278 | 4.9e-06 | 26.1 | 0.00072 | 2.1 | 8.2 |
| pfu_aug1.0_1795.1_22759.t1 | 6 | 2 | Arm | 333 | 365 | 4.9e-06 | 26.1 | 0.00025 | 0.75 | 9.7 |
| pfu_aug1.0_1795.1_22759.t1 | 6 | 3 | Arm | 392 | 408 | 4.9e-06 | 26.1 | 0.85 | 2500.0 | -1.5 |
| pfu_aug1.0_1795.1_22759.t1 | 6 | 4 | Arm | 412 | 436 | 4.9e-06 | 26.1 | 0.4 | 1200.0 | -0.5 |
| pfu_aug1.0_1795.1_22759.t1 | 6 | 5 | Arm | 454 | 469 | 4.9e-06 | 26.1 | 0.3 | 900.0 | -0.1 |
| pfu_aug1.0_1795.1_22759.t1 | 6 | 6 | Arm | 491 | 520 | 4.9e-06 | 26.1 | 0.36 | 1100.0 | -0.3 |
| pfu_aug1.0_1795.1_22759.t1 | 2 | 1 | SAM_2 | 535 | 600 | 8.6e-21 | 73.5 | 6.3e-16 | 1.9e-12 | 46.8 |
| pfu_aug1.0_1795.1_22759.t1 | 2 | 1 | SAM_1 | 537 | 600 | 4.2e-15 | 55.6 | 3.5e-14 | 1.0e-10 | 41.5 |
| pfu_aug1.0_1795.1_22759.t1 | 2 | 2 | SAM_2 | 606 | 657 | 8.6e-21 | 73.5 | 8.0e-09 | 2.4e-05 | 24.0 |
| pfu_aug1.0_1795.1_22759.t1 | 2 | 2 | SAM_1 | 609 | 656 | 4.2e-15 | 55.6 | 8.5e-05 | 0.25 | 11.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1795.1_22759.t1 | gi|242003523|ref|XP_002422762.1| | Sterile alpha and TIR motif-containing protein, putative [Pediculus humanus corporis] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1795.1_22759.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1795.1_22759.t1 atgtcaaaaagttcattttcgcgtggatcctccagaactgattctccacttgacatgttagatataaagacttcacattc agataagtttgatcccagtaaaatcatagaaaggtcgcagtccgatatctccatgctgccgaaatccacttcacaggagc agaaaaaaagtgtctcgtatcaagtctcatctagctccagcagcgaacgtgtcagtcgattacagaaagaaaagagcggt aaaatatctgaaagtgccaaagtttattttgatttatctagcgatgagtcttttgaatttggacaagctaagtcttcagt caattataaggacagaaaactctgcaaggaaaactcagttgactccctcagccaggaggaggaaatctccatcagtcggc attcgtcaagcgcaagtttgagatcgtcacaatctttagattcttttgcgtcagggagcacgtgttgtgaagagattcag gaggaggtgatttctttctgtaataaatacccacttgccatgccgatatctttgtcctccgatgccgtgaagtccagtca gaatatgatcaacttaaagtccagttataacagatttacacaggaaatggaggataacatccagcatctaatgtcacata aagggaaagaaggtatagatgacatcagacggttaaggcagactgtggtggaggcatggcatatgcccatatatgggcgg gacttggcatatgctctttgcgatgtgttgcgtaacgaaggtgtattagatttaatcatagaaaattgtcagtccacaga tcctgacatattggaaacctctgcatctttgcttgagcagtgcttatcatgggaaaacagaaaatatgtggagaaaaagg cattagattccattgttcaaatgacatttcagcagaaaaacaaccatggcatggcatacattacaactggtatattagag ggcctctttaagatatcagaggaagcctcaacaaaaattataagtcatggtggcttggatgtcatactccattggtcaaa atgtagcgacttaaaaactctgagacattgtgcaagagcaatgtcaaatttatctctgtttggtggtgcagagaatcagg aagaaatggctcgacggaacgtcccggagtggttattcccccttgcctttatggaagacgacaccgtccgttactatgca tgcttagctatatctgtccttgtagctaacaaggaattagaggcagctgtaatgaaatcaggaactctagatctcgtcat gccgttcataacaagtacaaaaccttccacatttgccaaaagtgacatatcgcaccagcagggtagggacattatctggt tagagcgtttggtacctcttttgtttagtcgcagggaggaggcgcaagctctagcagccttccactttgctatggaggcc ggaattaaggaggagcaaggcaggattcaggcattctatgaaatcaatgctgtggaacctctgaagaaagtagcaagcag ccctaatgccactgcctccaaactagctgcacaggcactcaaaataataggagagagtatcccccacaaactgacccccc aagtgcctgtgtggagtacggcggacgtcaaacactgggtggctcaggttgggtttcctgaatttgtagagaagtttgag acctgtcaggttgacggagatctcttactacagatgacaggagaggacctggaggacagtataggaatgaagtgtagagt ttccaggaaaagatttatgcgagagttgaagtcgctgaaaataacagcagattactcgtcatgtgatccgacacagatgg acagctggttgatgaagatcgtaccggagttgtctcagtacacatatcatatgctgaaaaacggcatgaacaaagaactc ctggccactactaacagcgaggagctggaaaactttggaatcactaaatcttctgcaaacatcgcccatggaagcattac agtggacaatgatggaaatatgttgtga |
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Protein
| Protein ID | pfu_aug1.0_1795.1_22759.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1795.1_22759.t1 MSKSSFSRGSSRTDSPLDMLDIKTSHSDKFDPSKIIERSQSDISMLPKSTSQEQKKSVSYQVSSSSSSERVSRLQKEKSG KISESAKVYFDLSSDESFEFGQAKSSVNYKDRKLCKENSVDSLSQEEEISISRHSSSASLRSSQSLDSFASGSTCCEEIQ EEVISFCNKYPLAMPISLSSDAVKSSQNMINLKSSYNRFTQEMEDNIQHLMSHKGKEGIDDIRRLRQTVVEAWHMPIYGR DLAYALCDVLRNEGVLDLIIENCQSTDPDILETSASLLEQCLSWENRKYVEKKALDSIVQMTFQQKNNHGMAYITTGILE GLFKISEEASTKIISHGGLDVILHWSKCSDLKTLRHCARAMSNLSLFGGAENQEEMARRNVPEWLFPLAFMEDDTVRYYA CLAISVLVANKELEAAVMKSGTLDLVMPFITSTKPSTFAKSDISHQQGRDIIWLERLVPLLFSRREEAQALAAFHFAMEA GIKEEQGRIQAFYEINAVEPLKKVASSPNATASKLAAQALKIIGESIPHKLTPQVPVWSTADVKHWVAQVGFPEFVEKFE TCQVDGDLLLQMTGEDLEDSIGMKCRVSRKRFMRELKSLKITADYSSCDPTQMDSWLMKIVPELSQYTYHMLKNGMNKEL LATTNSEELENFGITKSSANIAHGSITVDNDGNML |
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