Gene
Gene Model ID | pfu_aug1.0_18.1_14702 |
---|---|
Locus | scaffold18.1 : 98744 ... 122125 : - |
To GenomeBrowser | scaffold18.1:98744..122125 |
Genes list of scaffold | scaffold18.1 |
Synonym | pfu_aug2.0_2528.1_28841 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_18.1_14702.t1 | 2 | 1 | FERM_M | 281 | 322 | 6.6e-06 | 26.3 | 0.67 | 2500.0 | -1.4 |
pfu_aug1.0_18.1_14702.t1 | 2 | 2 | FERM_M | 443 | 566 | 6.6e-06 | 26.3 | 5.3e-09 | 2.0e-05 | 24.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_18.1_14702.t1 | gi|260819636|ref|XP_002605142.1| | hypothetical protein BRAFLDRAFT_265772 [Branchiostoma floridae] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_18.1_14702.t1 |
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Definition | - |
>pfu_aug1.0_18.1_14702.t1 atggaaatcattctagcagtattgcagcccaaacaaaatgtaattgctgggatagagtaccgacccaaattatataatat cctccttctagattataagacgactttacacggagagaaaagtaaagtcaccaagtacctgccaacgtttacacagacaa gctctgaagagccccgagatgaggtgcttactcacctgttccatatcactggaggggaattaggtggaattaaagagaag gtgaatcgtgtgtttacagagaagtcctccagcagcccaggattgttttctctggattatgtgatagacacgttcaataa tggaacggttaactaccccccacccacaaaattcttcatctcccagctggaaagctggctcagagagaaacatcaaatag caggagtgctggacatgttattctgcagccgtgccgagtatcgtgttaaatatagcatcagtaaccccgcctacctgcct agccattatgacattccaacgaacgttacagatcaaaatctgatggtctcgagtccaatgccggaagaaatacggcaaac agctaatgaggccatgacaaaaatgttagcgatagaaaaatgtgatattgtagtgattaatcctatctttggatcaggac tcccttatagaacaaaggtagataattttgtaaagaacatgtactggggcagagagatacctgattacagctcgctatct acacctagtactagcagttcatacgagagtctgtattcagaactacataaatatgctcgggacgggaacctagcggcact cagtgacaagatcaatcaggggtattacgttaatgatattgattccaaacgttttacagctttacactgggcagcatgat ttattgaaaccaaaggagaggtgtatgatagcagtcataaaacggccttgaactactgtgaagaacagttggaaagatca ccgcctcattcacagatctacgatatccttaaatctgctcttaaacaagctagtcaactatcagtacatatcgttgatgg atcaaagaaactgctaaggttatctaacggaaaaagcacaactgttcaacagttaaatcgtcaattgctcagggatttca aaattccagatgcctacgccgaagtgttcacaatatggatttgttccgagagtctagagttacaacttaaaaagcaccac cgccccatggagcatctaaacaactggacaaagaagatcgtcggaatgttaacagacggagaccccaaacaggaagagcc acgccttaaatggagaaggaacgctaagatagggctgtccgatgaaaaacagattcagcatgaaaaagtgatttacctgt tattccacgaggcgtaccagaactacatcaaggcactgtacccgtgtaaagacaacgacgtctgtatgttcgcgtctatt tatatcttcatgcatcagaatggtgactacgaagtttcccatgccaagtctttcgtcaggttcaacaaatcatatcgtaa cctcatcctctgtcacttattggtctgtgatgtcattgtgctttcagaaataacttctatgtacaatttctattctagag aacatctcaagacacttgtaccagagcccatgctgaaagcaaagggacataactggccaacgaggattttagatttctat aagaagtattgtgccaaccttaaagatgaaatatcatcaaggaatgaaactgtacataaggtcatgttacaaagttttag gtacaccgagatacagtggagtttaccagacatcagttccttagatatcaaagtcaaaagattcgagggaaaatttgatc gtaattccaccccacggcaaatagcaatacggacaaaacaggctggtctcatcgaccatttaatgaaaaaactttcccaa atgcacgcgttagacgacagagttgttgatattcggtattctcggggtagtaatattaatatcgtgtga |
Protein
Protein ID | pfu_aug1.0_18.1_14702.t1 |
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Definition | - |
>pfu_aug1.0_18.1_14702.t1 MEIILAVLQPKQNVIAGIEYRPKLYNILLLDYKTTLHGEKSKVTKYLPTFTQTSSEEPRDEVLTHLFHITGGELGGIKEK VNRVFTEKSSSSPGLFSLDYVIDTFNNGTVNYPPPTKFFISQLESWLREKHQIAGVLDMLFCSRAEYRVKYSISNPAYLP SHYDIPTNVTDQNLMVSSPMPEEIRQTANEAMTKMLAIEKCDIVVINPIFGSGLPYRTKVDNFVKNMYWGREIPDYSSLS TPSTSSSYESLYSELHKYARDGNLAALSDKINQGYYVNDIDSKRFTALHWAAXFIETKGEVYDSSHKTALNYCEEQLERS PPHSQIYDILKSALKQASQLSVHIVDGSKKLLRLSNGKSTTVQQLNRQLLRDFKIPDAYAEVFTIWICSESLELQLKKHH RPMEHLNNWTKKIVGMLTDGDPKQEEPRLKWRRNAKIGLSDEKQIQHEKVIYLLFHEAYQNYIKALYPCKDNDVCMFASI YIFMHQNGDYEVSHAKSFVRFNKSYRNLILCHLLVCDVIVLSEITSMYNFYSREHLKTLVPEPMLKAKGHNWPTRILDFY KKYCANLKDEISSRNETVHKVMLQSFRYTEIQWSLPDISSLDIKVKRFEGKFDRNSTPRQIAIRTKQAGLIDHLMKKLSQ MHALDDRVVDIRYSRGSNINIV |