Gene
| Gene Model ID | pfu_aug1.0_18.1_14705 |
|---|---|
| Locus | scaffold18.1 : 172566 ... 177764 : + |
| To GenomeBrowser | scaffold18.1:172566..177764 |
| Genes list of scaffold | scaffold18.1 |
| Synonym | pfu_aug2.0_2528.1_28844 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18.1_14705.t1 | 1 | 1 | SOCS_box | 602 | 641 | 1.0e-05 | 25.2 | 3.3e-09 | 2.4e-05 | 24.0 |
Transcript
| Transcript ID | pfu_aug1.0_18.1_14705.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18.1_14705.t1 atgacagacaaggaagtacccatcgccatggaccaagatgaacagcgtgacacctcatgggtaaaggacgtgctaaatct tactgatgaagacttgatatataaatttgctgaggatgaaatgctgtcagggagagctttattttactattgccttacta ttggaagaaatctgcattgccattgtctacgagatctagagttacttataaagcaggaggaagaggtgctgtatcaaaat atacaacggtatggcgtttatcatgaaatcggatgttgtccacatgtctggaaaataatggagggatcagaaaagggaac ggattcaattataagccagaagattgttctcagtatctgcaacgaagacgaaattagaactaagcgatatattttcgatg aatatatgatgaagcttgaaaaatgtggtgatggttcacgagttaagctcataactactcacgaaagtactcaatcaccc gcaaacaactggacaaacaaagtaacttattacgcaactttgtctgcatcacccattttgaacatcctgaccgctctagg aagaaacaatgtcattgagcgattggtgtatgattctaccatagacctaggtttcctgaaaatgcatattgggacgtatc aaaagtcacagacccttggacttatgccaattcatattgcaatcgaacacgaacatgtccaaattcaaaaattatatctc gaccttctgggagacggttacttttattcactagaatcaagtcatatcggcaaaatgatatacttgttcgctctcaaacg aaacgatatgaaaatattttatttgttgctgaagaaatataaaaagctccgaagtaaagtcgaataccagaaaattctat ctacatctatggcgttttcattcgcaaatggaaaagatgctggtatcctaaaaggtcttgccaaaaagggggccactctt gatgccttgcctatatgggttgagaatctaaccccctttacaagtatgatgatcaaagaagtattggagaaagttgtatc tacagcagatttagaggttgtcaacctggcactgaagtcaaaactttttgatttcgacatgggttatacattagaaagag tggtttttcatgaaatgtgcatgccaaagaaaagtttgaaagttacaaagttaacacctatcaaccaaaatcgatatgtg tccacacacatcaccaatcaggatgtcaggtatgcagcacgcttctctagtgcgctggattctacagcttgcagtgattt gttgatgcaaagaacatccagaattttaaagatagatttgttttcgtcggctgaatcgactcgtagccctctaattgaga tattcaaatttgaaagcaaatataggagcagatctgaacttctacaaactataattgagaaggagggaatagtgctatct gattacggacattcgcttcttggggaggcacttcgagttcatgatcaccagtcgatacaagttttgctcttggcaggtgc agatccatttcctgtacatgcgctatcagagaaatatttgatggatataattcactgtaatgtgaatatttcagataatc ttaaatccatgcttccttacaaggagacctatcaacgatccatagccaattttttgtttgtgttgacctctgttccgtgt ttttcagcggcggatagagcatatctgaacattttcacgcgtgattttgaacagcttagtggaggcagtacctcttctga atctgataccttgatgcgagttatagacatattactgaaccaaccgtcgtcacttcaagtcttatgtcgaaatgtgctga gaaatacttaccgtagaagggaaatatttcgtctcgtgaattctactccacttccaagacagattaaacgatttcttctc ttggaggaggcattagaggaatttagagccacagttgaaccagtcagattactgacgaatttagactgtttcatatcaaa gttttctgataaaccatcttga |
|
Protein
| Protein ID | pfu_aug1.0_18.1_14705.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18.1_14705.t1 MTDKEVPIAMDQDEQRDTSWVKDVLNLTDEDLIYKFAEDEMLSGRALFYYCLTIGRNLHCHCLRDLELLIKQEEEVLYQN IQRYGVYHEIGCCPHVWKIMEGSEKGTDSIISQKIVLSICNEDEIRTKRYIFDEYMMKLEKCGDGSRVKLITTHESTQSP ANNWTNKVTYYATLSASPILNILTALGRNNVIERLVYDSTIDLGFLKMHIGTYQKSQTLGLMPIHIAIEHEHVQIQKLYL DLLGDGYFYSLESSHIGKMIYLFALKRNDMKIFYLLLKKYKKLRSKVEYQKILSTSMAFSFANGKDAGILKGLAKKGATL DALPIWVENLTPFTSMMIKEVLEKVVSTADLEVVNLALKSKLFDFDMGYTLERVVFHEMCMPKKSLKVTKLTPINQNRYV STHITNQDVRYAARFSSALDSTACSDLLMQRTSRILKIDLFSSAESTRSPLIEIFKFESKYRSRSELLQTIIEKEGIVLS DYGHSLLGEALRVHDHQSIQVLLLAGADPFPVHALSEKYLMDIIHCNVNISDNLKSMLPYKETYQRSIANFLFVLTSVPC FSAADRAYLNIFTRDFEQLSGGSTSSESDTLMRVIDILLNQPSSLQVLCRNVLRNTYRRREIFRLVNSTPLPRQIKRFLL LEEALEEFRATVEPVRLLTNLDCFISKFSDKPS |
|