Gene
| Gene Model ID | pfu_aug1.0_18.1_14720 |
|---|---|
| Locus | scaffold18.1 : 382473 ... 412855 : - |
| To GenomeBrowser | scaffold18.1:382473..412855 |
| Genes list of scaffold | scaffold18.1 |
| Synonym | pfu_aug2.0_302.1_07326 |
Manual annotation
| Study field | Metabolism |
|---|---|
| Gene name | glycerol-3-phosphate dehydrogenase |
| Description | homology to glycerol-3-phosphate dehydrogenase, putative [Pediculus humanus corporis] |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18.1_14720.t1 | 1 | 1 | DAO | 96 | 464 | 0.0 | 166.9 | 0.0 | 0.0 | 166.4 |
| pfu_aug1.0_18.1_14720.t1 | 1 | 1 | EF-hand_7 | 654 | 710 | 4.2e-12 | 46.0 | 1.2e-14 | 9.9e-12 | 44.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18.1_14720.t1 | gi|115942939|ref|XP_782036.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 15 |
| 8-16cell | 1 |
| trochophore | 3 |
| >Adult tissues | |
| maleGonad | 3 |
| mantle | 3 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_18.1_14720.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18.1_14720.t1 atgtgtatcgtattatcgtacccaaatctacatttgggcatgacgagtcgtataattaccggctgtacgccgtcattgga tttgaattccagagcattaccaatgaagactactaaattgagcactataaatgccctgacccggattcgatctgcagtgg ttggatttgaattccagagtgtgccccccagtcgtccggtgttggcagatgaggataacaagtatgcttgggcaccttta ccatccagacagcaactatggaactcactggagaaagaagaatttgacgtgctagtggtgggtgggggtgccacagggtg tggtgtagcttttgatgctgtaagcagaggtcttaaaacagccttggttgagaagtttgattatggagcgggcacaagca gtagaagtacaaagctgatccatggtggagtcagatatctagagaaagctgtcttcaatcttgacattgaacagtacaga atggtcaaagaggctctgagtgagagagcaaacttgattcaaattgctccacatttggcataccctttcccaataatgtt acctatttataaactctggcaggtaccctatttctgggcaggaattaagtcgtatgatttagtggccggcaaacagcttc tccatcgtagtttctatcttagtaagaaaaaagcactagaaaaattccccatgttaaagaaggatgcacttgtaggggca ttggtatattatgatggtcagcatgacgatgccagaatgaacattgcgattgctatgtcagccattagaatgggtggttc cttgctcaactacacagaagtggtggaaatacataaatctaaggacagcactggtaaagatgtggtgtctggggccaaaa tcagggacagaattacagggaaagaggtagatgtaaaagctaaatgtgtggtcaacgctgctggaccttacactgacaga attagattaatggacaaccctgaaaataagaaaatatgtcagccaagctcaggggtacatattgtattgcctgattatta tagtccagagagaatgggtctgttagatccctccactagtgatggccgagtcattttcttcctcccatggcaaaaacata ctcttgcaggtaccacagatacaccgtgtgaaatctctgattatccatcaccgactgagaaagaaatccagtttatactt aatgaagtaaaaaattatcttaatccagatgtagaagtacgtagaggtgatgtattgtcggcatggtgtggcattcgtcc gttagtcagtgatcccaataaggagaatacccaatccatagcacgtaatcacattatagaagtgtcccatgataatctta tcactattgcaggtggtaagtggacgacatatcgtcacatggcagaggaaaccatagataaagctgtacagatctgtggt ctaaagcccaagtcagcgtgccgcaccaagggacttctcctggacggagctcatggctggacacctacgctgttcatcag acttgtacaggactttggtctggaaaatgaggtggctcagcatctagcagccacatatggagacaaatcctttaaagtgg caaaaatggcagcaatgaccggcaagaggtggccagtggtgggaaaaaggctccatgaagaatttccttatttagaggct gaggtgcggtttgcagtacgggagtatgcgtgtacggcaatagatgttttagcaaggaggacaagactggcgttttgtaa tgctaatgctgcagcagaagccttgcctcgtgttgtggaaataatggctgaagaactcaagtggagtaaagcacgcaaac aggaagagattgagaaaacccagaattttttgcgtcgcgagatgggtttagaacttggtagtggagcagcaaatatacca atcaacttcactaaagatgaaattaacacctacgtcaagaaattcaacaccttggattacaacaagaagggttatattac agtcaatgatctcagaacatattttaagaaaactggagaacgagtgacagaggatcagttacatgatatattaaatgaag tagatctgaacagaaacgctcaagttgatcttggagaattcttacagttttcgtgtcgcctgcaaagcatagcaacactt acggatcgctttgtccgttgtcagcctgtccatttgtccgactgtctgtcacacttggatgtctgtttttcgcacttgga tgtcacaccctatataaaagtgattcctaagtgtcgctatgttttgcaggcgacatatgcattccttggaatgattttat tactattacgtctttatgaaacttgtgataccaaaaaaattatgtcaaggtcacacgcgccatatcttacttcattttgt gctatactctag |
|
Protein
| Protein ID | pfu_aug1.0_18.1_14720.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18.1_14720.t1 MCIVLSYPNLHLGMTSRIITGCTPSLDLNSRALPMKTTKLSTINALTRIRSAVVGFEFQSVPPSRPVLADEDNKYAWAPL PSRQQLWNSLEKEEFDVLVVGGGATGCGVAFDAVSRGLKTALVEKFDYGAGTSSRSTKLIHGGVRYLEKAVFNLDIEQYR MVKEALSERANLIQIAPHLAYPFPIMLPIYKLWQVPYFWAGIKSYDLVAGKQLLHRSFYLSKKKALEKFPMLKKDALVGA LVYYDGQHDDARMNIAIAMSAIRMGGSLLNYTEVVEIHKSKDSTGKDVVSGAKIRDRITGKEVDVKAKCVVNAAGPYTDR IRLMDNPENKKICQPSSGVHIVLPDYYSPERMGLLDPSTSDGRVIFFLPWQKHTLAGTTDTPCEISDYPSPTEKEIQFIL NEVKNYLNPDVEVRRGDVLSAWCGIRPLVSDPNKENTQSIARNHIIEVSHDNLITIAGGKWTTYRHMAEETIDKAVQICG LKPKSACRTKGLLLDGAHGWTPTLFIRLVQDFGLENEVAQHLAATYGDKSFKVAKMAAMTGKRWPVVGKRLHEEFPYLEA EVRFAVREYACTAIDVLARRTRLAFCNANAAAEALPRVVEIMAEELKWSKARKQEEIEKTQNFLRREMGLELGSGAANIP INFTKDEINTYVKKFNTLDYNKKGYITVNDLRTYFKKTGERVTEDQLHDILNEVDLNRNAQVDLGEFLQFSCRLQSIATL TDRFVRCQPVHLSDCLSHLDVCFSHLDVTPYIKVIPKCRYVLQATYAFLGMILLLLRLYETCDTKKIMSRSHAPYLTSFC AIL |
|