Gene
Gene Model ID | pfu_aug1.0_18.1_14720 |
---|---|
Locus | scaffold18.1 : 382473 ... 412855 : - |
To GenomeBrowser | scaffold18.1:382473..412855 |
Genes list of scaffold | scaffold18.1 |
Synonym | pfu_aug2.0_302.1_07326 |
Manual annotation
Study field | Metabolism |
---|---|
Gene name | glycerol-3-phosphate dehydrogenase |
Description | homology to glycerol-3-phosphate dehydrogenase, putative [Pediculus humanus corporis] |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_18.1_14720.t1 | 1 | 1 | DAO | 96 | 464 | 0.0 | 166.9 | 0.0 | 0.0 | 166.4 |
pfu_aug1.0_18.1_14720.t1 | 1 | 1 | EF-hand_7 | 654 | 710 | 4.2e-12 | 46.0 | 1.2e-14 | 9.9e-12 | 44.8 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_18.1_14720.t1 | gi|115942939|ref|XP_782036.2| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 15 |
8-16cell | 1 |
trochophore | 3 |
>Adult tissues | |
maleGonad | 3 |
mantle | 3 |
mantleEdge | 1 |
Transcript
Transcript ID | pfu_aug1.0_18.1_14720.t1 |
---|---|
Definition | - |
>pfu_aug1.0_18.1_14720.t1 atgtgtatcgtattatcgtacccaaatctacatttgggcatgacgagtcgtataattaccggctgtacgccgtcattgga tttgaattccagagcattaccaatgaagactactaaattgagcactataaatgccctgacccggattcgatctgcagtgg ttggatttgaattccagagtgtgccccccagtcgtccggtgttggcagatgaggataacaagtatgcttgggcaccttta ccatccagacagcaactatggaactcactggagaaagaagaatttgacgtgctagtggtgggtgggggtgccacagggtg tggtgtagcttttgatgctgtaagcagaggtcttaaaacagccttggttgagaagtttgattatggagcgggcacaagca gtagaagtacaaagctgatccatggtggagtcagatatctagagaaagctgtcttcaatcttgacattgaacagtacaga atggtcaaagaggctctgagtgagagagcaaacttgattcaaattgctccacatttggcataccctttcccaataatgtt acctatttataaactctggcaggtaccctatttctgggcaggaattaagtcgtatgatttagtggccggcaaacagcttc tccatcgtagtttctatcttagtaagaaaaaagcactagaaaaattccccatgttaaagaaggatgcacttgtaggggca ttggtatattatgatggtcagcatgacgatgccagaatgaacattgcgattgctatgtcagccattagaatgggtggttc cttgctcaactacacagaagtggtggaaatacataaatctaaggacagcactggtaaagatgtggtgtctggggccaaaa tcagggacagaattacagggaaagaggtagatgtaaaagctaaatgtgtggtcaacgctgctggaccttacactgacaga attagattaatggacaaccctgaaaataagaaaatatgtcagccaagctcaggggtacatattgtattgcctgattatta tagtccagagagaatgggtctgttagatccctccactagtgatggccgagtcattttcttcctcccatggcaaaaacata ctcttgcaggtaccacagatacaccgtgtgaaatctctgattatccatcaccgactgagaaagaaatccagtttatactt aatgaagtaaaaaattatcttaatccagatgtagaagtacgtagaggtgatgtattgtcggcatggtgtggcattcgtcc gttagtcagtgatcccaataaggagaatacccaatccatagcacgtaatcacattatagaagtgtcccatgataatctta tcactattgcaggtggtaagtggacgacatatcgtcacatggcagaggaaaccatagataaagctgtacagatctgtggt ctaaagcccaagtcagcgtgccgcaccaagggacttctcctggacggagctcatggctggacacctacgctgttcatcag acttgtacaggactttggtctggaaaatgaggtggctcagcatctagcagccacatatggagacaaatcctttaaagtgg caaaaatggcagcaatgaccggcaagaggtggccagtggtgggaaaaaggctccatgaagaatttccttatttagaggct gaggtgcggtttgcagtacgggagtatgcgtgtacggcaatagatgttttagcaaggaggacaagactggcgttttgtaa tgctaatgctgcagcagaagccttgcctcgtgttgtggaaataatggctgaagaactcaagtggagtaaagcacgcaaac aggaagagattgagaaaacccagaattttttgcgtcgcgagatgggtttagaacttggtagtggagcagcaaatatacca atcaacttcactaaagatgaaattaacacctacgtcaagaaattcaacaccttggattacaacaagaagggttatattac agtcaatgatctcagaacatattttaagaaaactggagaacgagtgacagaggatcagttacatgatatattaaatgaag tagatctgaacagaaacgctcaagttgatcttggagaattcttacagttttcgtgtcgcctgcaaagcatagcaacactt acggatcgctttgtccgttgtcagcctgtccatttgtccgactgtctgtcacacttggatgtctgtttttcgcacttgga tgtcacaccctatataaaagtgattcctaagtgtcgctatgttttgcaggcgacatatgcattccttggaatgattttat tactattacgtctttatgaaacttgtgataccaaaaaaattatgtcaaggtcacacgcgccatatcttacttcattttgt gctatactctag |
Protein
Protein ID | pfu_aug1.0_18.1_14720.t1 |
---|---|
Definition | - |
>pfu_aug1.0_18.1_14720.t1 MCIVLSYPNLHLGMTSRIITGCTPSLDLNSRALPMKTTKLSTINALTRIRSAVVGFEFQSVPPSRPVLADEDNKYAWAPL PSRQQLWNSLEKEEFDVLVVGGGATGCGVAFDAVSRGLKTALVEKFDYGAGTSSRSTKLIHGGVRYLEKAVFNLDIEQYR MVKEALSERANLIQIAPHLAYPFPIMLPIYKLWQVPYFWAGIKSYDLVAGKQLLHRSFYLSKKKALEKFPMLKKDALVGA LVYYDGQHDDARMNIAIAMSAIRMGGSLLNYTEVVEIHKSKDSTGKDVVSGAKIRDRITGKEVDVKAKCVVNAAGPYTDR IRLMDNPENKKICQPSSGVHIVLPDYYSPERMGLLDPSTSDGRVIFFLPWQKHTLAGTTDTPCEISDYPSPTEKEIQFIL NEVKNYLNPDVEVRRGDVLSAWCGIRPLVSDPNKENTQSIARNHIIEVSHDNLITIAGGKWTTYRHMAEETIDKAVQICG LKPKSACRTKGLLLDGAHGWTPTLFIRLVQDFGLENEVAQHLAATYGDKSFKVAKMAAMTGKRWPVVGKRLHEEFPYLEA EVRFAVREYACTAIDVLARRTRLAFCNANAAAEALPRVVEIMAEELKWSKARKQEEIEKTQNFLRREMGLELGSGAANIP INFTKDEINTYVKKFNTLDYNKKGYITVNDLRTYFKKTGERVTEDQLHDILNEVDLNRNAQVDLGEFLQFSCRLQSIATL TDRFVRCQPVHLSDCLSHLDVCFSHLDVTPYIKVIPKCRYVLQATYAFLGMILLLLRLYETCDTKKIMSRSHAPYLTSFC AIL |