Gene
| Gene Model ID | pfu_aug1.0_18070.1_69159 |
|---|---|
| Locus | scaffold18070.1 : 1 ... 21639 : - |
| To GenomeBrowser | scaffold18070.1:1..21639 |
| Genes list of scaffold | scaffold18070.1 |
| Synonym | pfu_aug2.0_3458.1_29107 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18070.1_69159.t1 | 7 | 1 | Laminin_EGF | 320 | 368 | 0.0 | 154.0 | 4.6e-13 | 3.4e-09 | 36.4 |
| pfu_aug1.0_18070.1_69159.t1 | 7 | 2 | Laminin_EGF | 366 | 407 | 0.0 | 154.0 | 1.3e-08 | 9.9e-05 | 22.1 |
| pfu_aug1.0_18070.1_69159.t1 | 7 | 3 | Laminin_EGF | 407 | 434 | 0.0 | 154.0 | 9.8e-05 | 0.72 | 9.8 |
| pfu_aug1.0_18070.1_69159.t1 | 7 | 4 | Laminin_EGF | 589 | 636 | 0.0 | 154.0 | 1.1e-12 | 8.1e-09 | 35.2 |
| pfu_aug1.0_18070.1_69159.t1 | 7 | 5 | Laminin_EGF | 639 | 689 | 0.0 | 154.0 | 4.5e-10 | 3.3e-06 | 26.9 |
| pfu_aug1.0_18070.1_69159.t1 | 7 | 6 | Laminin_EGF | 692 | 736 | 0.0 | 154.0 | 5.4e-09 | 4.0e-05 | 23.4 |
| pfu_aug1.0_18070.1_69159.t1 | 7 | 7 | Laminin_EGF | 739 | 782 | 0.0 | 154.0 | 7.4e-11 | 5.5e-07 | 29.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18070.1_69159.t1 | gi|115628123|ref|XP_796271.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_18070.1_69159.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18070.1_69159.t1 gattacatggtattggtgccacaagcctactatgaggccactgtcctacaacaaacagttaccagaccatgtacagtgcc taatgatcctggaccgtgtattctgtacaattatcctgatcttggaggatttcctaccgttaatggtgaaaatggttaca ctatagatgctgatcaaaaccagaccaagacacaagtgttcactgacaaaatcatccttaacgagttaggtctgcctgca ttggctaaactggacaaaaaccagaaagatttatacctgaatattagagtgccaagacctggacgatatgtcttagtagt aaattactatgcattgtccaaccgtactcaggaccttgatgtgaatgtcagaacacaagcaggggaaaccaggggaaatg ttctgttgtacagctgctcatatagtgtactttgtcgtcaagtaatgacagacccagacaacatgccgtctataatcaac atcaccgattctgccgaaatctacatcagaggagatgatgatgttgatgtagctattgggtcagttgtggcaattccata cgacacttggtcactgggctacattagacccaacataatctgtatcagaatcaatggaatctgtataggatctggatact ccattcctgtagggtctataaggatagactttgaggacccaccaaacgagggtatgagagttaaagaaggagatctacca ccgaacatcctagaccgtagtactggcctagtcagactgaatggctcaaatgactatgtgatgcttgttccggcacgcca gtattctgtaacagatctaaaccttcaacccatcgacaactctgccaatttccttactcagtgtattggtcctggattcg aactgataagtaattctgagttttgcctgaacggtaccttcaccatcaccaccgattttaacaacggtgccgtggcatgt aactgtgacactgatggttcactcagctttgactgcagtgattttggtggccagtgtaaatgtagagagaatgtcatcgg tagaaagtgtacacactgtagagagggctactttggcttctccagatgtagaaggtgtaactgtccatatggtatgtgtc acccagtgacaggggactgtatgtgcccaccacgtgttacaggggatagctgtgaccagtgtatgccagctacttatggt tatgatccgcttgttggatgcacagacaacgtggcagagccagactgtagagattgtgagccaggcagcttctacctaaa tccaatgaatccaaagggctgtaccaagtgtttctgttttggtgttaccacagcttgtggtagctctgatctagtctggg aggaggtaacatcttacggcggaaagttaaaattcacctccatttacatcaatcctagagatgacggtgtcacagcagat aggattacccgtcctgcaatcatattagtgggtgacaatgtgacactgcatttgaagtattccattaatgtagcaccaag ccgatctacagacgttgaagtagaactgattgaggtaattagtaaaacttggttgataaacgcaagattagaacatgccg ttgttaaaacagcagtggatgataagactgatgatgataatgatgacggaggcggattcttggctttttctttggtggag atgaagacagtgataatacccaggtggaggataagagagcttactctgtggagcagtgtcagtgtccacgaggatacatg ggatcatcatgtcagttttgcatcaagatgtgatgtgatcagtggacaagtgatttcatgtgattgtcaagaaggatata caggccaactctgtgacagatgttcccctggttactatggagaccctaggacagttggtgagatctgccgtccttgccag tgttctggtaacatcgacacacgcgacccttatgcttgtgacttggctaccggagaatgtctgagatgtctgaataacac aacaggacctaactgtgcttactgtcaggaatggttccatggtgatgctgtcaatgccaaggactgcagatcttgtgatt gtgaccaatgtggttcatcatcctgtgacagagatagtggtacatgtacatgtaaacctaatgttgtgggacctacctgc tctcagtgtgctcctgatacgtatggtttctccggatgtaatggatgccgggattgtaactgtggagcggcatctgtaca gtcacagtgtgatgataacggacagtgtacgtgccaaccaggagtaacgggacgtgcctgtgatatgtgtatagaggggt actggaattatggacccagtggatgtcaagagtgtgacagttgtgtccatattctcctggatgatgttgaagtattagag aggaacatttcccggctatctatcaacttagagagcgtctccattggtgtcactgcctttaagagacttgaagacataaa caatacagtatatgagcttaggccccatgttgatgacttacttagcggagcgcaggacattgccttaggcccattacaag aggctgtcagagaattacaaaccgaagcagatgatggaaaattcaagtcggagtctgtagccggtgatggagaaaacact gtaaatgttgctagaacacttttcaacgaggcttacaatacagatgctctagctaatgataccaatgctcaagctctcgc cgcagtgcagcaagccaaagatgttctagagaatgttgagaagggtatacaagtaacaaacattgaaacttacattaccc agtctgagatgatcctgaatgaaatcctaacttcagtcttattgatgcttacaacaggacagaaagggaacatgaactca catttgaac |
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Protein
| Protein ID | pfu_aug1.0_18070.1_69159.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18070.1_69159.t1 DYMVLVPQAYYEATVLQQTVTRPCTVPNDPGPCILYNYPDLGGFPTVNGENGYTIDADQNQTKTQVFTDKIILNELGLPA LAKLDKNQKDLYLNIRVPRPGRYVLVVNYYALSNRTQDLDVNVRTQAGETRGNVLLYSCSYSVLCRQVMTDPDNMPSIIN ITDSAEIYIRGDDDVDVAIGSVVAIPYDTWSLGYIRPNIICIRINGICIGSGYSIPVGSIRIDFEDPPNEGMRVKEGDLP PNILDRSTGLVRLNGSNDYVMLVPARQYSVTDLNLQPIDNSANFLTQCIGPGFELISNSEFCLNGTFTITTDFNNGAVAC NCDTDGSLSFDCSDFGGQCKCRENVIGRKCTHCREGYFGFSRCRRCNCPYGMCHPVTGDCMCPPRVTGDSCDQCMPATYG YDPLVGCTDNVAEPDCRDCEPGSFYLNPMNPKGCTKCFCFGVTTACGSSDLVWEEVTSYGGKLKFTSIYINPRDDGVTAD RITRPAIILVGDNVTLHLKYSINVAPSRSTDVEVELIEVISKTWLINARLEHAVVKTAVDDKTDDDNDDGGGFLAFSLVE MKTVIIPRWRIRELTLWSSVSVHEDTWDHHVSFASRCDVISGQVISCDCQEGYTGQLCDRCSPGYYGDPRTVGEICRPCQ CSGNIDTRDPYACDLATGECLRCLNNTTGPNCAYCQEWFHGDAVNAKDCRSCDCDQCGSSSCDRDSGTCTCKPNVVGPTC SQCAPDTYGFSGCNGCRDCNCGAASVQSQCDDNGQCTCQPGVTGRACDMCIEGYWNYGPSGCQECDSCVHILLDDVEVLE RNISRLSINLESVSIGVTAFKRLEDINNTVYELRPHVDDLLSGAQDIALGPLQEAVRELQTEADDGKFKSESVAGDGENT VNVARTLFNEAYNTDALANDTNAQALAAVQQAKDVLENVEKGIQVTNIETYITQSEMILNEILTSVLLMLTTGQKGNMNS HLN |
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