Gene
| Gene Model ID | pfu_aug1.0_1815.1_37124 |
|---|---|
| Locus | scaffold1815.1 : 116776 ... 123342 : + |
| To GenomeBrowser | scaffold1815.1:116776..123342 |
| Genes list of scaffold | scaffold1815.1 |
| Synonym | pfu_aug2.0_315.1_17277 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1815.1_37124.t1 | 1 | 1 | ELO | 2 | 150 | 0.0 | 167.7 | 0.0 | 0.0 | 167.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1815.1_37124.t1 | gi|147904124|ref|NP_001089378.1| | uncharacterized protein LOC734428 [Xenopus laevis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1815.1_37124.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1815.1_37124.t1 atggcaaatgtatgctggtggttcttcttctccaaagttattgagctattggatactgttttctttattttacggaagaa gtttagacaggtgtcctttttacatgtgtaccatcatgctactatgatatttaattggtgggctggagtcaaatacgtcg caggaggacagtcattttttacagggatgttgaactccttcgtacatatatttatgtattcatactacgctttatccgtc ttcccacaacttcaaaaacatctatggtggaaaaagtaccttactagactgcaactggtacaattctttgcgtttgttat acacacgggatataacctgtttttcacggactgtgattttcctcagggatttaacattgccgtatttggatatgcgattt ctctgattattttatttggaaacttttacttgcgctcttacattaagggtantagataa |
|
Protein
| Protein ID | pfu_aug1.0_1815.1_37124.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1815.1_37124.t1 MANVCWWFFFSKVIELLDTVFFILRKKFRQVSFLHVYHHATMIFNWWAGVKYVAGGQSFFTGMLNSFVHIFMYSYYALSV FPQLQKHLWWKKYLTRLQLVQFFAFVIHTGYNLFFTDCDFPQGFNIAVFGYAISLIILFGNFYLRSYIKGXR |
|