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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1823.1_58659
Locus scaffold1823.1 : 319 ... 4132 : +
To GenomeBrowser scaffold1823.1:319..4132
Genes list of scaffold scaffold1823.1
Synonym pfu_aug2.0_18275.1_19920

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1823.1_58659.t1 gi|260812704|ref|XP_002601060.1| hypothetical protein BRAFLDRAFT_214538 [Branchiostoma floridae] 8.0e-33

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_1823.1_58659.t1
Definition-
>pfu_aug1.0_1823.1_58659.t1
atgatagactgtatcgcggactccatgttccacacccatgtgaaaagaatggaagtacctcataccgctaccgttaggcc
atgccataattgtgatgcccgagggtactttcgatgttgggagtgtggaggatggggtaggatcgtatgtgacgattgtg
atgggcgtggctggcatcagcgccacgatccccatggaaacccttacagggataactgccaccgttgtcatggagatggt
atagcctcatgtcatcgttgtgggggagatggaagaattacatgtgagcaatgtgacggctacagaaacctcaaaaccta
catagagcttactgttacttttacgaaccaccaaggtgaacatattgtagagaggacggacatgccggacgaactggtca
gagaaggacaaggagatactctattcgaacaaacattacccatggtgagtagatctggtgtatag

Protein
Protein IDpfu_aug1.0_1823.1_58659.t1
Definition-
>pfu_aug1.0_1823.1_58659.t1
MIDCIADSMFHTHVKRMEVPHTATVRPCHNCDARGYFRCWECGGWGRIVCDDCDGRGWHQRHDPHGNPYRDNCHRCHGDG
IASCHRCGGDGRITCEQCDGYRNLKTYIELTVTFTNHQGEHIVERTDMPDELVREGQGDTLFEQTLPMVSRSGV

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