Gene
| Gene Model ID | pfu_aug1.0_1823.1_58662 |
|---|---|
| Locus | scaffold1823.1 : 39626 ... 49798 : + |
| To GenomeBrowser | scaffold1823.1:39626..49798 |
| Genes list of scaffold | scaffold1823.1 |
| Synonym | pfu_aug2.0_7790.1_02933 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1823.1_58662.t1 | 2 | 1 | Nrf1_DNA-bind | 31 | 74 | 0.0 | 192.6 | 3.1e-19 | 4.6e-15 | 55.3 |
| pfu_aug1.0_1823.1_58662.t1 | 2 | 2 | Nrf1_DNA-bind | 75 | 156 | 0.0 | 192.6 | 2.52234e-44 | 3.7e-40 | 137.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1823.1_58662.t1 | gi|291241308|ref|XP_002740555.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1823.1_58662.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1823.1_58662.t1 atgacctttgacctagtgaccctgaccttggactttgacctacttttcgaaaactttaaccagggcttatatctcttgaa atataagggaaaactcaagacttgtatagaggagtatacaacaagagtgggacaacaagccgttgtgttgtgttgtactc caggaaaagtacagaacaacaacaacttcaaagtgtttggctcacagcctctagaaaatgtggcacagttgcggacattc atccctgaaatgttaaagttttcaacaaacagaagtaagccaggttggggtaaagcggagtttaaaccagtatggtggcc agacagtgtaccttgggctaacgttagaagtgatgtcagaacaccacaacagaaaaaggaggtatcttggacagaggctt tacggaccatagtttaccattgctacaagcatcatggcagagaagatcttttacacgcctttgagggccaggagcagagt tctgccgctcagtcaagaacgatgttccagactataaataaccctgacggaactgtctcaatcatacaaatagaaacggc ccctaaccaggtggtaacactaccagatggtacccaggctactgttgtacatacgatacaagatggaatacctctacatg aagctaatcaagcagttaaaactctagcagacgttgcctccaatcagcaagaggccagcactctacaaatgacgcccgtc agtgttgaaatgaactcggatacggttaggcataatattgcaacaatctcagaggaaggacatattgtactcacaggaga cgatctaggaactacatcag |
|
Protein
| Protein ID | pfu_aug1.0_1823.1_58662.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1823.1_58662.t1 MTFDLVTLTLDFDLLFENFNQGLYLLKYKGKLKTCIEEYTTRVGQQAVVLCCTPGKVQNNNNFKVFGSQPLENVAQLRTF IPEMLKFSTNRSKPGWGKAEFKPVWWPDSVPWANVRSDVRTPQQKKEVSWTEALRTIVYHCYKHHGREDLLHAFEGQEQS SAAQSRTMFQTINNPDGTVSIIQIETAPNQVVTLPDGTQATVVHTIQDGIPLHEANQAVKTLADVASNQQEASTLQMTPV SVEMNSDTVRHNIATISEEGHIVLTGDDLGTTS |
|