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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1825.1_22767
Locus scaffold1825.1 : 5846 ... 14733 : +
To GenomeBrowser scaffold1825.1:5846..14733
Genes list of scaffold scaffold1825.1
Synonym pfu_aug2.0_8003.1_12963

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1825.1_22767.t1 1 1 Pep_M12B_propep 65 185 3.0e-12 46.4 3.8e-16 5.6e-12 45.5

Transcript
Transcript IDpfu_aug1.0_1825.1_22767.t1
Definition-
>pfu_aug1.0_1825.1_22767.t1
atgaacatacaaacagacagcattacgcaggggcccaagaaacacacagatggatatgtaaatggatataaaaatacaga
aggcatacgaaatacagtccgtgttctgccggctgcagctacatacagcagagttgggcaactcgtcctccttgataaaa
caaaacatcataaatcttctgcacgagtttgctacgaacatgttagacttactaaactccatatgagacatgacgggtat
agtgcaatagagaaaaggaggaacaagcgatcagcaattagaaattccagagttctgttccggagttatggaaagacctt
caggttgaccttgacacggcctgacaaaattcttcacccgcatgcaataatatccgtaacacgagaacaagagagtatag
gatggacaggggaacacccggaatgcttcttaactggaaaaaccgataataacaaaggaattgcaacattttcgtactgc
gacaatttgatgggaggaattcgaatggacgacttttcataccatattgaagcagtgcatccatctaatagacgccatac
tcgatctccaagattacttcatcgagtgattgttgccagaaaaaggctggataaaattggtaagccctcattgaagctgg
gagacctccatagaagacgcaaaagacaatcaaacagcaaggatgttaccatagagatggctgtttatacggatgctgcg
tttactgccgtttttccgagtgaagacattcagcagcgaatagctctgataattatgaagtacaatggggtaactgaatg
a

Protein
Protein IDpfu_aug1.0_1825.1_22767.t1
Definition-
>pfu_aug1.0_1825.1_22767.t1
MNIQTDSITQGPKKHTDGYVNGYKNTEGIRNTVRVLPAAATYSRVGQLVLLDKTKHHKSSARVCYEHVRLTKLHMRHDGY
SAIEKRRNKRSAIRNSRVLFRSYGKTFRLTLTRPDKILHPHAIISVTREQESIGWTGEHPECFLTGKTDNNKGIATFSYC
DNLMGGIRMDDFSYHIEAVHPSNRRHTRSPRLLHRVIVARKRLDKIGKPSLKLGDLHRRRKRQSNSKDVTIEMAVYTDAA
FTAVFPSEDIQQRIALIIMKYNGVTE

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