Gene
| Gene Model ID | pfu_aug1.0_1827.1_00863 |
|---|---|
| Locus | scaffold1827.1 : 35206 ... 55533 : + |
| To GenomeBrowser | scaffold1827.1:35206..55533 |
| Genes list of scaffold | scaffold1827.1 |
| Synonym | pfu_aug2.0_107.1_23482 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1827.1_00863.t1 | gi|241561673|ref|XP_002401207.1| | brahma/SWI2-related protein BRG-1 [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 2 |
Transcript
| Transcript ID | pfu_aug1.0_1827.1_00863.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1827.1_00863.t1 atgcaaccacaaccaaggtttcctcctcaaggacctcctatgagaccttatcaacaacctggatatccagggggtcccag accaggtggctatggaatgccggggcagatggggccaggtggtccacccagaatgatgccacatgggggcatgccaccgc atccttatggtatgaggccggggatgtcacccggcatgcctccccctccacatggcatgcagacaccacatggcatggac aggaaacgcccacctgatcccagggcatctcaacatcaaatgaaagcaactccaacaacgcaagaaacggatggtttcca ggtcaaacgtccaggggaccagaatgtgaagtgcacggtgctactgatgcttgactatcaaatttttgagtgcggtagaa tgaagtttgcagagattcccagcaagctacacagcttactgatgcctcccgaccccattgtaataaatcatgttattact cctcattccagggtggagggacccgacgcaaggaaaacagcctgctacgacatcgatgtggaagtggatgatactttgaa gcagcagatgaattccttcctcctctccacacagagtcaacatgaaatcagctcattggataataagatacatgagacgg tggacaccatcaatcagctgaagacaaacagggaattcttcctcagcttcgccaaaagtccacaagaatttatcaacaac tggttaatatctcagaccagagatctcaagacgatgacagacgtagctgggaatccggaggaagaaaggcgagcagatta ttattaccagccctggtcacaggaagctgtctgtagatacttctatggaaaggtccagcaaaggagacaggaattagagc aggctctaggaatacgtaacacgtaa |
|
Protein
| Protein ID | pfu_aug1.0_1827.1_00863.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1827.1_00863.t1 MQPQPRFPPQGPPMRPYQQPGYPGGPRPGGYGMPGQMGPGGPPRMMPHGGMPPHPYGMRPGMSPGMPPPPHGMQTPHGMD RKRPPDPRASQHQMKATPTTQETDGFQVKRPGDQNVKCTVLLMLDYQIFECGRMKFAEIPSKLHSLLMPPDPIVINHVIT PHSRVEGPDARKTACYDIDVEVDDTLKQQMNSFLLSTQSQHEISSLDNKIHETVDTINQLKTNREFFLSFAKSPQEFINN WLISQTRDLKTMTDVAGNPEEERRADYYYQPWSQEAVCRYFYGKVQQRRQELEQALGIRNT |
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