Gene
| Gene Model ID | pfu_aug1.0_1827.1_00864 |
|---|---|
| Locus | scaffold1827.1 : 60236 ... 65525 : + |
| To GenomeBrowser | scaffold1827.1:60236..65525 |
| Genes list of scaffold | scaffold1827.1 |
| Synonym | pfu_aug2.0_107.1_23483 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1827.1_00864.t1 | 3 | 1 | EF-hand_1 | 1 | 22 | 1.1e-17 | 61.8 | 0.00022 | 0.33 | 10.3 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 1 | EF-hand_8 | 1 | 20 | 1.0e-13 | 50.6 | 0.01 | 15.0 | 5.2 |
| pfu_aug1.0_1827.1_00864.t1 | 2 | 1 | EF-hand_7 | 5 | 57 | 3.9e-21 | 74.9 | 4.3e-12 | 6.4e-09 | 35.8 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 1 | EF-hand_6 | 5 | 24 | 6.3e-13 | 47.4 | 0.0042 | 6.2 | 6.9 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 1 | EF-hand_5 | 6 | 18 | 8.6e-13 | 46.9 | 0.58 | 860.0 | -0.5 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 2 | EF-hand_8 | 13 | 58 | 1.0e-13 | 50.6 | 3.8e-05 | 0.056 | 13.0 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 2 | EF-hand_1 | 33 | 58 | 1.1e-17 | 61.8 | 8.5e-10 | 1.3e-06 | 27.3 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 2 | EF-hand_6 | 33 | 58 | 6.3e-13 | 47.4 | 1.7e-09 | 2.5e-06 | 26.9 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 2 | EF-hand_5 | 35 | 57 | 8.6e-13 | 46.9 | 8.6e-09 | 1.3e-05 | 24.3 |
| pfu_aug1.0_1827.1_00864.t1 | 2 | 2 | EF-hand_7 | 37 | 93 | 3.9e-21 | 74.9 | 9.6e-16 | 1.4e-12 | 47.5 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 3 | EF-hand_8 | 46 | 93 | 1.0e-13 | 50.6 | 6.4e-15 | 9.4e-12 | 44.3 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 3 | EF-hand_1 | 68 | 93 | 1.1e-17 | 61.8 | 8.7e-10 | 1.3e-06 | 27.2 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 3 | EF-hand_5 | 69 | 91 | 8.6e-13 | 46.9 | 7.7e-08 | 0.00011 | 21.3 |
| pfu_aug1.0_1827.1_00864.t1 | 3 | 3 | EF-hand_6 | 73 | 93 | 6.3e-13 | 47.4 | 7.5e-05 | 0.11 | 12.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 2 |
| >Adult tissues | |
| Dshape | 2 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1827.1_00864.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1827.1_00864.t1 atgtttgtgggtgttgatacggatggaagcaaagatgtaacgaagaaagagtttttgacagaaatgatgaaaaagaacgc aaaagaatcaaaggcagaatatgaaaaaatctttcaaaaatgggacaaggatggcagtggtacattaacaagagatgaac tgaagaaggcagttctagagaaaagacacttcaatgaagatgaaatcgatgacatgcttgctcaggcagacaaaaatggc gacggtgtaatcaattattgcgaatttatgaaatatatgtgcggtgaacagagttcacagaaagcttcataa |
|
Protein
| Protein ID | pfu_aug1.0_1827.1_00864.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1827.1_00864.t1 MFVGVDTDGSKDVTKKEFLTEMMKKNAKESKAEYEKIFQKWDKDGSGTLTRDELKKAVLEKRHFNEDEIDDMLAQADKNG DGVINYCEFMKYMCGEQSSQKAS |
|