Gene
| Gene Model ID | pfu_aug1.0_18278.1_03905 |
|---|---|
| Locus | scaffold18278.1 : 7996 ... 22860 : + |
| To GenomeBrowser | scaffold18278.1:7996..22860 |
| Genes list of scaffold | scaffold18278.1 |
| Synonym | pfu_aug2.0_959.1_31312 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18278.1_03905.t1 | 2 | 1 | Cyclin_N | 3 | 62 | 4.1e-24 | 84.5 | 2.8e-26 | 1.4e-22 | 79.6 |
| pfu_aug1.0_18278.1_03905.t1 | 2 | 1 | Cyclin_C | 42 | 59 | 4.0e-29 | 100.9 | 0.64 | 3200.0 | -2.0 |
| pfu_aug1.0_18278.1_03905.t1 | 2 | 2 | Cyclin_C | 66 | 158 | 4.0e-29 | 100.9 | 8.8e-33 | 4.4e-29 | 100.8 |
| pfu_aug1.0_18278.1_03905.t1 | 2 | 2 | Cyclin_N | 84 | 138 | 4.1e-24 | 84.5 | 0.01 | 51.0 | 3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18278.1_03905.t1 | gi|116179|sp|P24862.1|CCNB_PATVU | G2/mitotic-specific cyclin-B [Patella vulgata] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_18278.1_03905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18278.1_03905.t1 atgatacatcctgtgacgaggaacaaactacagttggttggtgtaacatcaatgctcatagcttctaagtatgaagaaat gtatgctccagaagttgcagactttgtgtatataacagacaatgcatatcagaaaaaagacattcgtgatatggaagctt tgatactaaaaacactagattttagctttggtaaaccattgtgcctgcatttcttaagaaggaattctaaagcaggacag gttgatgccaacaagcatactctagccaaatacctgatggagctgaccatcattgagtatgatatggtgcaatataatcc ctcggaaattgctgcagctgccctttgtctttcaatgaaattactagatggatcactttggacggataccttgtcacatt acagttcatacagtgagaatgacttattgccactaatgcaaaaactatgcagtcttgttgtgaaagcagaaacatataaa ttgacg |
|
Protein
| Protein ID | pfu_aug1.0_18278.1_03905.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18278.1_03905.t1 MIHPVTRNKLQLVGVTSMLIASKYEEMYAPEVADFVYITDNAYQKKDIRDMEALILKTLDFSFGKPLCLHFLRRNSKAGQ VDANKHTLAKYLMELTIIEYDMVQYNPSEIAAAALCLSMKLLDGSLWTDTLSHYSSYSENDLLPLMQKLCSLVVKAETYK LT |
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