Gene
| Gene Model ID | pfu_aug1.0_1828.1_44154 |
|---|---|
| Locus | scaffold1828.1 : 40950 ... 45595 : - |
| To GenomeBrowser | scaffold1828.1:40950..45595 |
| Genes list of scaffold | scaffold1828.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1828.1_44154.t1 | 1 | 1 | TPR_11 | 158 | 214 | 9.5e-12 | 44.4 | 9.9e-15 | 1.5e-11 | 43.7 |
| pfu_aug1.0_1828.1_44154.t1 | 2 | 1 | TPR_2 | 161 | 182 | 3.6e-08 | 32.7 | 2.6e-05 | 0.038 | 13.8 |
| pfu_aug1.0_1828.1_44154.t1 | 2 | 1 | TPR_1 | 162 | 182 | 1.0e-07 | 31.2 | 6.4e-06 | 0.0095 | 15.5 |
| pfu_aug1.0_1828.1_44154.t1 | 2 | 2 | TPR_2 | 187 | 215 | 3.6e-08 | 32.7 | 3.2e-06 | 0.0047 | 16.7 |
| pfu_aug1.0_1828.1_44154.t1 | 2 | 2 | TPR_1 | 191 | 215 | 1.0e-07 | 31.2 | 3.0e-05 | 0.045 | 13.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1828.1_44154.t1 | gi|291227703|ref|XP_002733822.1| | PREDICTED: tetratricopeptide repeat protein 28-like [Saccoglossus kowalevskii] | 3.0e-19 |
Transcript
| Transcript ID | pfu_aug1.0_1828.1_44154.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1828.1_44154.t1 atgctcaatatggacgaaaacgatcttgtcttcggtttgttgggccaagacttcatacatagtgcagagttacatagttc tacaaatggacaaataggatttcatcgtacaaaaccaatacgtggaccaccgtctcctagagaaactagtcaaagttcaa ataagaatgcagcgtatggtcagaaaacgaataaagaggtcaagtcagtaccacaaggtcaaggacaaagcatggagagt tcaatgatacatcatcaacactcagtgcctggtccctctacatctaggcatagttatggccatcaaagtgggccactatc atcaccaagtcaaagcaagaaatctactcccagtaaaactcagatatcaaccaatcaaaatgcttgtggatcttcaatgg cgcttgcttccggtcaggtgatttcaccagccaatcagaccttgtatttacaaaagatacgggaaagttcggaagctgtg aatagtggtgatttccgtagggctgtacagttatattctgaagctataacgcttgatccgtctaatcatatcttgttcac gaacagatctgcggcttatgcaaaactacaccaataccagaaaagtctcgaagacgcaagagaagccaaagtcctgaatc ccaaatgggcaaaggtgagtgatattcctttcaaactgtatactttcagtcgacagttgtcacaaactatgtag |
|
Protein
| Protein ID | pfu_aug1.0_1828.1_44154.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1828.1_44154.t1 MLNMDENDLVFGLLGQDFIHSAELHSSTNGQIGFHRTKPIRGPPSPRETSQSSNKNAAYGQKTNKEVKSVPQGQGQSMES SMIHHQHSVPGPSTSRHSYGHQSGPLSSPSQSKKSTPSKTQISTNQNACGSSMALASGQVISPANQTLYLQKIRESSEAV NSGDFRRAVQLYSEAITLDPSNHILFTNRSAAYAKLHQYQKSLEDAREAKVLNPKWAKVSDIPFKLYTFSRQLSQTM |
|