Gene
| Gene Model ID | pfu_aug1.0_1833.1_37136 |
|---|---|
| Locus | scaffold1833.1 : 39736 ... 53109 : + |
| To GenomeBrowser | scaffold1833.1:39736..53109 |
| Genes list of scaffold | scaffold1833.1 |
| Synonym | pfu_aug2.0_1612.1_08476 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1833.1_37136.t1 | 1 | 1 | TSGA13 | 62 | 291 | 2.2e-18 | 66.4 | 1.8e-22 | 2.7e-18 | 66.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1833.1_37136.t1 | gi|291224703|ref|XP_002732340.1| | PREDICTED: ankyrin repeat domain-containing protein 11-like [Saccoglossus kowalevskii] | 5.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| maleGonad | 1 |
| mantleEdge | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1833.1_37136.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1833.1_37136.t1 atggccaggacccctacaaacccggatttcctggagagagaggcctcctggtccatgcccaacccacaggacctggaaat gcaccaattccacttgtacaagatgtttggtaaaggagcagacgacttcctgcatccaaaaatagaaccagtagcaaaga aaactgtcaattctaaactacgtaagcaaggaggtcgagctggagctcaaaggctatggaacacactcaggaaagaatcc tatgttagattgctgaaagaagatgcacacgtacctactgaattgaaggaaacttacagtgcctttataagggaaagcat tgacaaggaccgaaaaccaatacgaagattcttttgtgctaaagaagatgttccagagttgggtcggctacaagatcaga ctgctttagtacgagtcaggaacctaaaacataaaattgacttgatgtatcgagcctctaggaataaccaggatagaacg gaaatacttctccacaataaccagttacctgaggtggccctgtcacaggaggagcctgacgtttccagatatttaccgtc atggatggacgactggtcggattcaagtgacccagattacctgaagtgggtcagagaagttcaacagcaaggaggaagag atgttaccaaggaaaccatcaacgaacatgaggaggaggaaattcaggatggttttagggaaaacaaaaaatatgaagga tttgatgatgagcttatactgctgatgacacgtaaaaaacacaatcaagcgaaacctaagtatgtgttcctgacagagag tgacactaggtccaaggggaggttcacagataagttcagggatgaatatgacaacaaagatattccaaaaccatttgacg gcacaaaaattccgatggagaatgctaaatcagtgcttggcttgtccacagatcaaacatttgagttgcaggacataaat atatgccgccggtag |
|
Protein
| Protein ID | pfu_aug1.0_1833.1_37136.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1833.1_37136.t1 MARTPTNPDFLEREASWSMPNPQDLEMHQFHLYKMFGKGADDFLHPKIEPVAKKTVNSKLRKQGGRAGAQRLWNTLRKES YVRLLKEDAHVPTELKETYSAFIRESIDKDRKPIRRFFCAKEDVPELGRLQDQTALVRVRNLKHKIDLMYRASRNNQDRT EILLHNNQLPEVALSQEEPDVSRYLPSWMDDWSDSSDPDYLKWVREVQQQGGRDVTKETINEHEEEEIQDGFRENKKYEG FDDELILLMTRKKHNQAKPKYVFLTESDTRSKGRFTDKFRDEYDNKDIPKPFDGTKIPMENAKSVLGLSTDQTFELQDIN ICRR |
|