Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1835.1_37140
Locus scaffold1835.1 : 36816 ... 39873 : +
To GenomeBrowser scaffold1835.1:36816..39873
Genes list of scaffold scaffold1835.1
Synonym pfu_aug2.0_47.1_23318

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1835.1_37140.t1 1 1 RVT_1 38 161 5.2e-14 52.1 4.2e-18 6.3e-14 51.8

Transcript
Transcript IDpfu_aug1.0_1835.1_37140.t1
Definition-
>pfu_aug1.0_1835.1_37140.t1
atgctgttgtctatccctgggaaagtatcaattttgtcaagaattatactggagagatcctacacagaccatattgccac
catgcgtatattaattgaacggtccttagaggggcagactcccctctacactgtctttgtttacttccagaaggcgttcg
acagtgttgacggacatgtcatcttgagtctgatgcttcactacggctttccaccaaagtttgtcgacatcattttgcaa
ctatacaaggatgccacgtgtcaagttatccatgatgggaaactgacagagcccttctctgtgaaaactggggttcgtca
gggttgtttgctattatcaccgacaattttcctgatggtggtcgactgggtcatgcgacagtccacggctgacaagaaga
ccggtatccagtggacctttacaaaacatctggtgaatctggattttgcggacgacatcagtctactcacacaagcagca
agacgtacaagagaaactatgctgtgtcgcagaggaagccgagaaaacaggacttaa

Protein
Protein IDpfu_aug1.0_1835.1_37140.t1
Definition-
>pfu_aug1.0_1835.1_37140.t1
MLLSIPGKVSILSRIILERSYTDHIATMRILIERSLEGQTPLYTVFVYFQKAFDSVDGHVILSLMLHYGFPPKFVDIILQ
LYKDATCQVIHDGKLTEPFSVKTGVRQGCLLLSPTIFLMVVDWVMRQSTADKKTGIQWTFTKHLVNLDFADDISLLTQAA
RRTRETMLCRRGSRENRT

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495