Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1836.1_66110
Locus scaffold1836.1 : 42006 ... 45540 : +
To GenomeBrowser scaffold1836.1:42006..45540
Genes list of scaffold scaffold1836.1
Synonym pfu_aug2.0_189.1_30383

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1836.1_66110.t1 1 1 Neur_chan_memb 52 143 9.3e-35 120.6 3.6e-38 1.1e-34 120.4

Transcript
Transcript IDpfu_aug1.0_1836.1_66110.t1
Definition-
>pfu_aug1.0_1836.1_66110.t1
atgaagctctcttgtgactttcagctgagccactatcccttcgatgtgcaaatatgtcctataactatggaaagttgagg
aaagttctcgtgtctagaaggaaagctccatttcatacgtcgcagcggatattacgtcatacagatcttcggtccaagca
ttctcatcgtcatgttgtcctgggtatccttctggttggaccctgaggcatccccagctaggatttcattgggtatattg
agcgttctcaacatgacgacggccagtaacagcgctcgttcctccttacctaaggtttcctatgtgaaagctattgacgt
ctggatggcgacttgtttattctttgtttttgcagccctgattcactttgcgttcgtcaacgttttagcaagaagacaaa
aaagaagaatgtctgaaaaggtaagacaagaactttag

Protein
Protein IDpfu_aug1.0_1836.1_66110.t1
Definition-
>pfu_aug1.0_1836.1_66110.t1
MKLSCDFQLSHYPFDVQICPITMESXGKFSCLEGKLHFIRRSGYYVIQIFGPSILIVMLSWVSFWLDPEASPARISLGIL
SVLNMTTASNSARSSLPKVSYVKAIDVWMATCLFFVFAALIHFAFVNVLARRQKRRMSEKVRQEL

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