Gene
| Gene Model ID | pfu_aug1.0_1837.1_08138 |
|---|---|
| Locus | scaffold1837.1 : 1236 ... 6034 : + |
| To GenomeBrowser | scaffold1837.1:1236..6034 |
| Genes list of scaffold | scaffold1837.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1837.1_08138.t1 | 1 | 1 | EMP70 | 2 | 147 | 0.0 | 206.3 | 0.0 | 0.0 | 206.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1837.1_08138.t1 | gi|241691946|ref|XP_002412937.1| | endosomal membrane protein EMP70, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 1 |
| mantle | 1 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1837.1_08138.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1837.1_08138.t1 atggtttgtggtacagctttcttcatcaactttattgccatatactatcatgcctccagagctattccattcggtacaat ggtggcagtgacgtgtatatgcatatttgtgattttacctctaacactcgtgggaactgtacttggacgtaatcttgcag ggcaacctaactatccctgccgagtcaatgctgttccaagacctatcccagagaaaaaatggttcatggaaccagctgtg attatagtgttaggaggaatattgccgttcggttctatcttcattgaaatgtacttcattttcacctcattctgggccta caagatatattatgtgtatggattcatgctacttgtgtttgttatattgacaatagtaactgtgtgtgtcaccatcgtgt gtacttatttcctgctgaatgcagaggactacagatggcatactacatacgaaaattttctatga |
|
Protein
| Protein ID | pfu_aug1.0_1837.1_08138.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1837.1_08138.t1 MVCGTAFFINFIAIYYHASRAIPFGTMVAVTCICIFVILPLTLVGTVLGRNLAGQPNYPCRVNAVPRPIPEKKWFMEPAV IIVLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMLLVFVILTIVTVCVTIVCTYFLLNAEDYRWHTTYENFL |
|