Gene
Gene Model ID | pfu_aug1.0_1837.1_08138 |
---|---|
Locus | scaffold1837.1 : 1236 ... 6034 : + |
To GenomeBrowser | scaffold1837.1:1236..6034 |
Genes list of scaffold | scaffold1837.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1837.1_08138.t1 | 1 | 1 | EMP70 | 2 | 147 | 0.0 | 206.3 | 0.0 | 0.0 | 206.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1837.1_08138.t1 | gi|241691946|ref|XP_002412937.1| | endosomal membrane protein EMP70, putative [Ixodes scapularis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
egg-Dshape | 1 |
trochophore | 1 |
>Adult tissues | |
Dshape | 1 |
maleGonad | 1 |
mantle | 1 |
mantlePallium | 1 |
Transcript
Transcript ID | pfu_aug1.0_1837.1_08138.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1837.1_08138.t1 atggtttgtggtacagctttcttcatcaactttattgccatatactatcatgcctccagagctattccattcggtacaat ggtggcagtgacgtgtatatgcatatttgtgattttacctctaacactcgtgggaactgtacttggacgtaatcttgcag ggcaacctaactatccctgccgagtcaatgctgttccaagacctatcccagagaaaaaatggttcatggaaccagctgtg attatagtgttaggaggaatattgccgttcggttctatcttcattgaaatgtacttcattttcacctcattctgggccta caagatatattatgtgtatggattcatgctacttgtgtttgttatattgacaatagtaactgtgtgtgtcaccatcgtgt gtacttatttcctgctgaatgcagaggactacagatggcatactacatacgaaaattttctatga |
Protein
Protein ID | pfu_aug1.0_1837.1_08138.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1837.1_08138.t1 MVCGTAFFINFIAIYYHASRAIPFGTMVAVTCICIFVILPLTLVGTVLGRNLAGQPNYPCRVNAVPRPIPEKKWFMEPAV IIVLGGILPFGSIFIEMYFIFTSFWAYKIYYVYGFMLLVFVILTIVTVCVTIVCTYFLLNAEDYRWHTTYENFL |