Gene
Gene Model ID | pfu_aug1.0_1837.1_08144 |
---|---|
Locus | scaffold1837.1 : 59610 ... 80625 : - |
To GenomeBrowser | scaffold1837.1:59610..80625 |
Genes list of scaffold | scaffold1837.1 |
Synonym | pfu_aug2.0_179.1_30360 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1837.1_08144.t1 | 1 | 1 | zf-CHCC | 87 | 114 | 3.2e-08 | 33.2 | 3.4e-12 | 5.0e-08 | 32.6 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1837.1_08144.t1 | gi|260908491|gb|ACX53965.1| | 5.0e-23 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)Libraries | EST count |
---|---|
>Embryonic/Larval stages | |
mix | 1 |
egg-4cell | 2 |
trochophore | 1 |
>Adult tissues | |
mantleEdge | 1 |
mantlePallium | 1 |
pearlSac | 1 |
Transcript
Transcript ID | pfu_aug1.0_1837.1_08144.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1837.1_08144.t1 atggcccttgcaaggacattcgttagatcagcaacaattcggacacttgcacgactttcctcgtcatctgccaaacatgt gaccgatggtgaaaacgtagatgttacaactcacaccggacaggtttgggacaaagaagattataggagaattcgttttg tggatacagcaaaacaggtgaatccttattttgctatagacctgattgaggaggatccagtggtagtggttaacgctagt tcggtatggagtgacagtggaggggcaatggggcatcctaaagtttatatcaacttggatagacctcaagttggagtgtg tggatattcagggagaaaatttattcagaagaaattctacgatgagaaaacacacggaccttctataacatatgaacagt atttagaggaagtaagaccaaaaccgaggaattaa |
Protein
Protein ID | pfu_aug1.0_1837.1_08144.t1 |
---|---|
Definition | - |
>pfu_aug1.0_1837.1_08144.t1 MALARTFVRSATIRTLARLSSSSAKHVTDGENVDVTTHTGQVWDKEDYRRIRFVDTAKQVNPYFAIDLIEEDPVVVVNAS SVWSDSGGAMGHPKVYINLDRPQVGVCGYSGRKFIQKKFYDEKTHGPSITYEQYLEEVRPKPRN |