Gene
| Gene Model ID | pfu_aug1.0_1837.1_08145 |
|---|---|
| Locus | scaffold1837.1 : 87596 ... 112532 : + |
| To GenomeBrowser | scaffold1837.1:87596..112532 |
| Genes list of scaffold | scaffold1837.1 |
| Synonym | pfu_aug2.0_179.1_30357 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1837.1_08145.t1 | 2 | 1 | Cadherin | 11 | 33 | 1.5e-07 | 31.5 | 0.037 | 550.0 | 0.9 |
| pfu_aug1.0_1837.1_08145.t1 | 2 | 2 | Cadherin | 53 | 159 | 1.5e-07 | 31.5 | 3.4e-11 | 5.1e-07 | 29.8 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1837.1_08145.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1837.1_08145.t1 atgaaactgaaacaaagtcctttggacatcagtccacagcctataggagcccgtgaccaagacacgctcaattatagaat actgttctccatcaaaaatgcacgggtgattgtcaatccggttaacgaggagagtccagtatttcagaactcaccataca atgttgcggtgccagagaacacgcaggtgaatgacgtagtttttacgttcctcaacgttactgacgccgatataccccag acgacgacgttctactaccaactcattaactcaggaaactcggagattgacgcctccaattttttctatatttcctcggc aaccagtaaccaagtacgactcggtccgacgttaatagactttgacacaaacaaaaacacaaataatactctgtcctata caactacagtagcggttcaggactccagtgataacacagctcggacaggaaccacttatattacttttcaaatcactgat gttgatgatcttccgccaaagttcacgcttccaggatgtgacgtcaactgtgcacctgtatacacggctaaagttaaaga cacgtttccagtaaggaaattttatttttcatcctcctccaattttttttctcttgcataa |
|
Protein
| Protein ID | pfu_aug1.0_1837.1_08145.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1837.1_08145.t1 MKLKQSPLDISPQPIGARDQDTLNYRILFSIKNARVIVNPVNEESPVFQNSPYNVAVPENTQVNDVVFTFLNVTDADIPQ TTTFYYQLINSGNSEIDASNFFYISSATSNQVRLGPTLIDFDTNKNTNNTLSYTTTVAVQDSSDNTARTGTTYITFQITD VDDLPPKFTLPGCDVNCAPVYTAKVKDTFPVRKFYFSSSSNFFSLA |
|