Gene
| Gene Model ID | pfu_aug1.0_1837.1_08147 |
|---|---|
| Locus | scaffold1837.1 : 117437 ... 130111 : - |
| To GenomeBrowser | scaffold1837.1:117437..130111 |
| Genes list of scaffold | scaffold1837.1 |
| Synonym | pfu_aug2.0_179.1_30355 |
Manual annotation
| Study field | other |
|---|---|
| Gene name | phosphatase and tensin homolog (PTEN) |
| Description | BLASTP best hit to NCBI Accession XP002186954 |
| mRNA evidence |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1837.1_08147.t1 | 2 | 1 | PTEN_C2 | 142 | 292 | 2.3e-37 | 127.7 | 3.09995e-41 | 2.3e-37 | 127.7 |
| pfu_aug1.0_1837.1_08147.t1 | 2 | 2 | PTEN_C2 | 330 | 360 | 2.3e-37 | 127.7 | 0.081 | 600.0 | 0.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1837.1_08147.t1 | gi|15808383|gb|AAL08419.1| | PTEN [Takifugu rubripes] | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1837.1_08147.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1837.1_08147.t1 gtgctcagagagatcttatgatgtatccaagttttataaccgtgttgtgtgctatccatttgatgatcataacccaccga gacttgaactgattaaaccgttttgtgaggacctagatgattggctgagacaagatggacgaaatgtcgctgccattcac tgtaaagcaggcaaggtacggcaaaatgttgactgttctatagaagctttaaaagaaaaaaattatatattcaaaatgca aagtaccggtcgaactggtgtaatgatttgtgcttacatgttacatcgagggaaatttaatgatgcggaggaggcactaa ggtactacggtcagacaaggaccagggatgaaaagggagtgactatacctagccaagcacgttatgtggaatactacggc tacctcattaagcataaactggagtataagccaattacgctccttctccggggaatagagtttgtaacaattccaatgtt caactctagcgggggatgctccccaaactttgaagttttccagttaaaagtgaaagtgttctcatctaagacatatgagg atgttaagagaggacaggaacattttactatgaacattgaacaatcagttcctttgtgtggagatataaaggtggtcttc cttaataagccaagaatgatgaaaaaggaagttatgttccagttttggttcaacacgtacttcgtagggaaggatgatta caatattcctagtaatgacagtcagaatggaaagtccaaggagtgcaggtgtaccgagtacctgaacctaactctcccca aaatggatttagacaaagctaataaagataaagctcataaaaacttcagccctaatttcaaggttagactgcatttcgtc actcctgaaaacgaacaaattagttccactttacaagtcccaaaaccagcacaccatgtaggaacgcatacagatgaact tcatttacctcaacccacgtcacaaaacagtgtgcccatacagacttcttcctcgtgttcatcgctatctgtggtagata ataatgctcaagtagtgctcaaaaacagtcgcagaccacgacacgataaatcagcgctaacacctagcagtagtgacact ggatctggcacgggaagcctcgatgctatttccacggatgcttatagtgatacagaagcaccagaagtcgacctatctga aacggacactgacgatgagtgggagggcttagaaacaactgccgtgtga |
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Protein
| Protein ID | pfu_aug1.0_1837.1_08147.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1837.1_08147.t1 CSERSYDVSKFYNRVVCYPFDDHNPPRLELIKPFCEDLDDWLRQDGRNVAAIHCKAGKVRQNVDCSIEALKEKNYIFKMQ STGRTGVMICAYMLHRGKFNDAEEALRYYGQTRTRDEKGVTIPSQARYVEYYGYLIKHKLEYKPITLLLRGIEFVTIPMF NSSGGCSPNFEVFQLKVKVFSSKTYEDVKRGQEHFTMNIEQSVPLCGDIKVVFLNKPRMMKKEVMFQFWFNTYFVGKDDY NIPSNDSQNGKSKECRCTEYLNLTLPKMDLDKANKDKAHKNFSPNFKVRLHFVTPENEQISSTLQVPKPAHHVGTHTDEL HLPQPTSQNSVPIQTSSSCSSLSVVDNNAQVVLKNSRRPRHDKSALTPSSSDTGSGTGSLDAISTDAYSDTEAPEVDLSE TDTDDEWEGLETTAV |
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