Gene
Gene Model ID | pfu_aug1.0_1837.1_08147 |
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Locus | scaffold1837.1 : 117437 ... 130111 : - |
To GenomeBrowser | scaffold1837.1:117437..130111 |
Genes list of scaffold | scaffold1837.1 |
Synonym | pfu_aug2.0_179.1_30355 |
Manual annotation
Study field | other |
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Gene name | phosphatase and tensin homolog (PTEN) |
Description | BLASTP best hit to NCBI Accession XP002186954 |
mRNA evidence |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_1837.1_08147.t1 | 2 | 1 | PTEN_C2 | 142 | 292 | 2.3e-37 | 127.7 | 3.09995e-41 | 2.3e-37 | 127.7 |
pfu_aug1.0_1837.1_08147.t1 | 2 | 2 | PTEN_C2 | 330 | 360 | 2.3e-37 | 127.7 | 0.081 | 600.0 | 0.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_1837.1_08147.t1 | gi|15808383|gb|AAL08419.1| | PTEN [Takifugu rubripes] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_1837.1_08147.t1 |
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Definition | - |
>pfu_aug1.0_1837.1_08147.t1 gtgctcagagagatcttatgatgtatccaagttttataaccgtgttgtgtgctatccatttgatgatcataacccaccga gacttgaactgattaaaccgttttgtgaggacctagatgattggctgagacaagatggacgaaatgtcgctgccattcac tgtaaagcaggcaaggtacggcaaaatgttgactgttctatagaagctttaaaagaaaaaaattatatattcaaaatgca aagtaccggtcgaactggtgtaatgatttgtgcttacatgttacatcgagggaaatttaatgatgcggaggaggcactaa ggtactacggtcagacaaggaccagggatgaaaagggagtgactatacctagccaagcacgttatgtggaatactacggc tacctcattaagcataaactggagtataagccaattacgctccttctccggggaatagagtttgtaacaattccaatgtt caactctagcgggggatgctccccaaactttgaagttttccagttaaaagtgaaagtgttctcatctaagacatatgagg atgttaagagaggacaggaacattttactatgaacattgaacaatcagttcctttgtgtggagatataaaggtggtcttc cttaataagccaagaatgatgaaaaaggaagttatgttccagttttggttcaacacgtacttcgtagggaaggatgatta caatattcctagtaatgacagtcagaatggaaagtccaaggagtgcaggtgtaccgagtacctgaacctaactctcccca aaatggatttagacaaagctaataaagataaagctcataaaaacttcagccctaatttcaaggttagactgcatttcgtc actcctgaaaacgaacaaattagttccactttacaagtcccaaaaccagcacaccatgtaggaacgcatacagatgaact tcatttacctcaacccacgtcacaaaacagtgtgcccatacagacttcttcctcgtgttcatcgctatctgtggtagata ataatgctcaagtagtgctcaaaaacagtcgcagaccacgacacgataaatcagcgctaacacctagcagtagtgacact ggatctggcacgggaagcctcgatgctatttccacggatgcttatagtgatacagaagcaccagaagtcgacctatctga aacggacactgacgatgagtgggagggcttagaaacaactgccgtgtga |
Protein
Protein ID | pfu_aug1.0_1837.1_08147.t1 |
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Definition | - |
>pfu_aug1.0_1837.1_08147.t1 CSERSYDVSKFYNRVVCYPFDDHNPPRLELIKPFCEDLDDWLRQDGRNVAAIHCKAGKVRQNVDCSIEALKEKNYIFKMQ STGRTGVMICAYMLHRGKFNDAEEALRYYGQTRTRDEKGVTIPSQARYVEYYGYLIKHKLEYKPITLLLRGIEFVTIPMF NSSGGCSPNFEVFQLKVKVFSSKTYEDVKRGQEHFTMNIEQSVPLCGDIKVVFLNKPRMMKKEVMFQFWFNTYFVGKDDY NIPSNDSQNGKSKECRCTEYLNLTLPKMDLDKANKDKAHKNFSPNFKVRLHFVTPENEQISSTLQVPKPAHHVGTHTDEL HLPQPTSQNSVPIQTSSSCSSLSVVDNNAQVVLKNSRRPRHDKSALTPSSSDTGSGTGSLDAISTDAYSDTEAPEVDLSE TDTDDEWEGLETTAV |