Gene
| Gene Model ID | pfu_aug1.0_184.1_36353 |
|---|---|
| Locus | scaffold184.1 : 60966 ... 71338 : + |
| To GenomeBrowser | scaffold184.1:60966..71338 |
| Genes list of scaffold | scaffold184.1 |
| Synonym | pfu_aug2.0_172.1_07088 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_184.1_36353.t1 | 2 | 1 | MFS_1 | 90 | 241 | 9.5e-23 | 80.4 | 1.2e-13 | 8.9e-10 | 37.8 |
| pfu_aug1.0_184.1_36353.t1 | 3 | 1 | MFS_2 | 116 | 243 | 7.9e-18 | 64.0 | 5.1e-15 | 3.8e-11 | 42.0 |
| pfu_aug1.0_184.1_36353.t1 | 2 | 2 | MFS_1 | 270 | 424 | 9.5e-23 | 80.4 | 1.8e-16 | 1.3e-12 | 47.1 |
| pfu_aug1.0_184.1_36353.t1 | 3 | 2 | MFS_2 | 270 | 353 | 7.9e-18 | 64.0 | 3.0e-10 | 2.2e-06 | 26.3 |
| pfu_aug1.0_184.1_36353.t1 | 3 | 3 | MFS_2 | 384 | 430 | 7.9e-18 | 64.0 | 0.0043 | 32.0 | 2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_184.1_36353.t1 | gi|260827030|ref|XP_002608468.1| | hypothetical protein BRAFLDRAFT_146172 [Branchiostoma floridae] | 8.99998e-41 |
Transcript
| Transcript ID | pfu_aug1.0_184.1_36353.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_184.1_36353.t1 atggactcgtacgagcttagcatgatggaatacaatttaaagcacaggtcctcatccgtccttggtcattatgacaagcc gagcccaaatgtaccgtggacatcataccagtacggggattatcactcatgtgtgacagaggattcctcctaccagctcg ctcaatcaaccaatcaaaatcacagaaagagatgtgaatccccatccaatatggcttccaaatcattgtccttagtgcag atcgtgctcctgaatgcagtagtatgtggtatagagatatgtgcttgtgctgggttcacgtacgtaccacccatgctgtt gaaggctggatacacagaagaaaacatgagcatcatacttgggttaggtcctttgttagctttctttcttgtaccgataa taggtcgtgcaagtgatagttgtaaaagtcactatggacgcaggcgtccgtttatccttggtatatccttacttttagct gtctctctgatcattgtgccatatggagatgttataagcctgtggtttgtaggaccagggtcatggagtaagtcagtgac tgttggtatgcttactataggggtagtaatgttagactttactagccaggcatgtctcacaccatgtgaggcattactgt cagacgcctccaaggacaccgaccaacatgagaaagtgtttaccgtctattctcagatgataagtcttggagggttcatc ggctacctggcggtgtacgagggaagtcctaatgccgaggagaattcatatctacgcatgcgttatgacgagggtgtccg tatgggcagctggggactactctttcactgtatcacatctaccgtatatgctatgtttatagagagacttgtagagaagt atggcagtaagaggacatatttatgtggtatgattgtgtttactatctctatgctgggaatggtcatgtacagacatgtt gtgtttgtcagcatcatggccgccctgacaggattcgcctacgcaacactaactaccatccccttcatactcatcacaaa atatcattcagaaaaagaggtattctttagtgactgttcatcatcgtccaagcctgtttcacagcagagaggtatggcta ccgacatggccacgttagattctgcctacttcctatcgcaggtcgttctttcggcactgatgggatatgtcgtccatgtg acgggaaccgtgctctcgtacatcgttgtagcaggtgtcatgggacttctaagctgcttcttcatacgacagattgtagt ctgtcctgaagatctcaaaccacgcacaagacatcatcgtcatcatcaaaatagaacacttcacttatag |
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Protein
| Protein ID | pfu_aug1.0_184.1_36353.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_184.1_36353.t1 MDSYELSMMEYNLKHRSSSVLGHYDKPSPNVPWTSYQYGDYHSCVTEDSSYQLAQSTNQNHRKRCESPSNMASKSLSLVQ IVLLNAVVCGIEICACAGFTYVPPMLLKAGYTEENMSIILGLGPLLAFFLVPIIGRASDSCKSHYGRRRPFILGISLLLA VSLIIVPYGDVISLWFVGPGSWSKSVTVGMLTIGVVMLDFTSQACLTPCEALLSDASKDTDQHEKVFTVYSQMISLGGFI GYLAVYEGSPNAEENSYLRMRYDEGVRMGSWGLLFHCITSTVYAMFIERLVEKYGSKRTYLCGMIVFTISMLGMVMYRHV VFVSIMAALTGFAYATLTTIPFILITKYHSEKEVFFSDCSSSSKPVSQQRGMATDMATLDSAYFLSQVVLSALMGYVVHV TGTVLSYIVVAGVMGLLSCFFIRQIVVCPEDLKPRTRHHRHHQNRTLHL |
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