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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_184.1_36357
Locus scaffold184.1 : 133103 ... 158765 : -
To GenomeBrowser scaffold184.1:133103..158765
Genes list of scaffold scaffold184.1
Synonym pfu_aug2.0_172.1_07093

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_184.1_36357.t1 7 1 LRR_9 188 249 2.2e-12 46.9 0.085 130.0 2.0
pfu_aug1.0_184.1_36357.t1 12 1 LRR_8 194 247 0.0 353.4 1.3e-11 1.9e-08 33.9
pfu_aug1.0_184.1_36357.t1 16 1 LRR_4 194 223 0.0 160.9 0.22 330.0 1.0
pfu_aug1.0_184.1_36357.t1 5 1 LRR_5 197 309 0.0 168.5 5.1e-13 7.6e-10 38.5
pfu_aug1.0_184.1_36357.t1 18 1 LRR_7 211 224 6.2e-10 37.6 0.78 1200.0 0.6
pfu_aug1.0_184.1_36357.t1 16 2 LRR_4 212 252 0.0 160.9 7.3e-05 0.11 12.1
pfu_aug1.0_184.1_36357.t1 21 1 LRR_1 213 234 4.3e-31 102.1 0.26 390.0 1.7
pfu_aug1.0_184.1_36357.t1 16 1 LRR_6 234 248 8.8e-09 34.5 0.063 93.0 3.5
pfu_aug1.0_184.1_36357.t1 16 3 LRR_4 235 271 0.0 160.9 1.7e-06 0.0025 17.3
pfu_aug1.0_184.1_36357.t1 12 2 LRR_8 236 295 0.0 353.4 5.8e-16 8.6e-13 47.8
pfu_aug1.0_184.1_36357.t1 21 2 LRR_1 236 258 4.3e-31 102.1 0.00075 1.1 9.5
pfu_aug1.0_184.1_36357.t1 18 2 LRR_7 236 250 6.2e-10 37.6 0.3 450.0 1.8
pfu_aug1.0_184.1_36357.t1 16 2 LRR_6 259 271 8.8e-09 34.5 0.14 210.0 2.4
pfu_aug1.0_184.1_36357.t1 18 3 LRR_7 260 275 6.2e-10 37.6 0.037 55.0 4.6
pfu_aug1.0_184.1_36357.t1 16 4 LRR_4 261 296 0.0 160.9 7.3e-09 1.1e-05 24.9
pfu_aug1.0_184.1_36357.t1 21 3 LRR_1 261 280 4.3e-31 102.1 0.0073 11.0 6.5
pfu_aug1.0_184.1_36357.t1 7 2 LRR_9 263 325 2.2e-12 46.9 4.4e-05 0.066 12.7
pfu_aug1.0_184.1_36357.t1 5 2 LRR_5 276 402 0.0 168.5 1.1e-13 1.6e-10 40.7
pfu_aug1.0_184.1_36357.t1 16 3 LRR_6 282 295 8.8e-09 34.5 0.0046 6.9 7.0
pfu_aug1.0_184.1_36357.t1 12 3 LRR_8 283 343 0.0 353.4 4.6e-17 6.8e-14 51.3
pfu_aug1.0_184.1_36357.t1 16 5 LRR_4 283 322 0.0 160.9 6.6e-11 9.7e-08 31.4
pfu_aug1.0_184.1_36357.t1 18 4 LRR_7 283 296 6.2e-10 37.6 0.012 18.0 6.0
pfu_aug1.0_184.1_36357.t1 21 4 LRR_1 284 306 4.3e-31 102.1 0.00018 0.26 11.4
pfu_aug1.0_184.1_36357.t1 16 4 LRR_6 306 321 8.8e-09 34.5 0.00021 0.31 11.2
pfu_aug1.0_184.1_36357.t1 16 6 LRR_4 308 347 0.0 160.9 3.1e-08 4.7e-05 22.9
pfu_aug1.0_184.1_36357.t1 21 5 LRR_1 308 328 4.3e-31 102.1 1.9e-05 0.029 14.3
pfu_aug1.0_184.1_36357.t1 18 5 LRR_7 308 322 6.2e-10 37.6 0.0042 6.2 7.4
pfu_aug1.0_184.1_36357.t1 16 7 LRR_4 331 367 0.0 160.9 3.8e-07 0.00057 19.4
pfu_aug1.0_184.1_36357.t1 12 4 LRR_8 332 391 0.0 353.4 3.6e-20 5.4e-17 61.2
pfu_aug1.0_184.1_36357.t1 21 6 LRR_1 333 343 4.3e-31 102.1 0.24 360.0 1.8
pfu_aug1.0_184.1_36357.t1 18 6 LRR_7 333 343 6.2e-10 37.6 0.51 760.0 1.1
pfu_aug1.0_184.1_36357.t1 5 3 LRR_5 345 453 0.0 168.5 7.8e-14 1.2e-10 41.2
pfu_aug1.0_184.1_36357.t1 7 3 LRR_9 352 418 2.2e-12 46.9 4.4e-05 0.065 12.7
pfu_aug1.0_184.1_36357.t1 16 5 LRR_6 354 367 8.8e-09 34.5 0.034 50.0 4.4
pfu_aug1.0_184.1_36357.t1 18 7 LRR_7 355 367 6.2e-10 37.6 0.36 540.0 1.6
pfu_aug1.0_184.1_36357.t1 16 8 LRR_4 356 393 0.0 160.9 3.1e-06 0.0045 16.5
pfu_aug1.0_184.1_36357.t1 21 7 LRR_1 356 378 4.3e-31 102.1 0.0032 4.8 7.6
pfu_aug1.0_184.1_36357.t1 12 5 LRR_8 380 439 0.0 353.4 1.0e-14 1.5e-11 43.8
pfu_aug1.0_184.1_36357.t1 21 8 LRR_1 380 402 4.3e-31 102.1 0.0013 2.0 8.7
pfu_aug1.0_184.1_36357.t1 18 8 LRR_7 380 392 6.2e-10 37.6 0.47 700.0 1.2
pfu_aug1.0_184.1_36357.t1 16 6 LRR_6 380 391 8.8e-09 34.5 0.21 320.0 1.9
pfu_aug1.0_184.1_36357.t1 5 4 LRR_5 393 522 0.0 168.5 7.3e-12 1.1e-08 34.8
pfu_aug1.0_184.1_36357.t1 16 9 LRR_4 404 440 0.0 160.9 1.0e-07 0.00015 21.2
pfu_aug1.0_184.1_36357.t1 21 9 LRR_1 405 423 4.3e-31 102.1 0.0011 1.6 9.0
pfu_aug1.0_184.1_36357.t1 18 9 LRR_7 405 419 6.2e-10 37.6 0.12 180.0 3.1
pfu_aug1.0_184.1_36357.t1 7 4 LRR_9 410 501 2.2e-12 46.9 0.002 3.0 7.3
pfu_aug1.0_184.1_36357.t1 12 6 LRR_8 428 487 0.0 353.4 2.3e-16 3.5e-13 49.1
pfu_aug1.0_184.1_36357.t1 21 10 LRR_1 428 448 4.3e-31 102.1 0.0055 8.2 6.9
pfu_aug1.0_184.1_36357.t1 18 10 LRR_7 428 440 6.2e-10 37.6 0.4 590.0 1.5
pfu_aug1.0_184.1_36357.t1 16 10 LRR_4 452 491 0.0 160.9 7.1e-08 0.00011 21.7
pfu_aug1.0_184.1_36357.t1 21 11 LRR_1 452 472 4.3e-31 102.1 0.0012 1.7 8.9
pfu_aug1.0_184.1_36357.t1 18 11 LRR_7 452 464 6.2e-10 37.6 0.3 450.0 1.8
pfu_aug1.0_184.1_36357.t1 16 7 LRR_6 452 471 8.8e-09 34.5 0.014 21.0 5.5
pfu_aug1.0_184.1_36357.t1 16 8 LRR_6 475 488 8.8e-09 34.5 0.058 85.0 3.6
pfu_aug1.0_184.1_36357.t1 16 11 LRR_4 477 515 0.0 160.9 1.2e-07 0.00018 21.0
pfu_aug1.0_184.1_36357.t1 21 12 LRR_1 477 492 4.3e-31 102.1 0.0033 4.9 7.5
pfu_aug1.0_184.1_36357.t1 18 12 LRR_7 477 489 6.2e-10 37.6 0.014 21.0 5.8
pfu_aug1.0_184.1_36357.t1 12 7 LRR_8 484 521 0.0 353.4 9.1e-06 0.014 15.1
pfu_aug1.0_184.1_36357.t1 21 13 LRR_1 501 520 4.3e-31 102.1 0.019 28.0 5.2
pfu_aug1.0_184.1_36357.t1 7 5 LRR_9 527 592 2.2e-12 46.9 0.00032 0.47 9.9
pfu_aug1.0_184.1_36357.t1 16 9 LRR_6 528 548 8.8e-09 34.5 0.43 640.0 0.9
pfu_aug1.0_184.1_36357.t1 12 8 LRR_8 529 588 0.0 353.4 2.2e-16 3.2e-13 49.1
pfu_aug1.0_184.1_36357.t1 21 14 LRR_1 531 551 4.3e-31 102.1 0.02 29.0 5.2
pfu_aug1.0_184.1_36357.t1 16 12 LRR_4 532 567 0.0 160.9 1.8e-08 2.7e-05 23.6
pfu_aug1.0_184.1_36357.t1 5 5 LRR_5 533 646 0.0 168.5 3.3e-14 4.9e-11 42.4
pfu_aug1.0_184.1_36357.t1 16 10 LRR_6 551 565 8.8e-09 34.5 0.0098 15.0 6.0
pfu_aug1.0_184.1_36357.t1 18 13 LRR_7 552 565 6.2e-10 37.6 0.012 17.0 6.1
pfu_aug1.0_184.1_36357.t1 21 15 LRR_1 553 573 4.3e-31 102.1 0.026 38.0 4.8
pfu_aug1.0_184.1_36357.t1 18 14 LRR_7 576 591 6.2e-10 37.6 0.016 24.0 5.7
pfu_aug1.0_184.1_36357.t1 12 9 LRR_8 577 636 0.0 353.4 2.1e-18 3.1e-15 55.6
pfu_aug1.0_184.1_36357.t1 16 13 LRR_4 577 613 0.0 160.9 3.0e-08 4.5e-05 22.9
pfu_aug1.0_184.1_36357.t1 21 16 LRR_1 577 599 4.3e-31 102.1 0.0018 2.7 8.3
pfu_aug1.0_184.1_36357.t1 16 11 LRR_6 577 589 8.8e-09 34.5 0.035 53.0 4.3
pfu_aug1.0_184.1_36357.t1 7 6 LRR_9 600 682 2.2e-12 46.9 9.6e-06 0.014 14.9
pfu_aug1.0_184.1_36357.t1 18 15 LRR_7 600 614 6.2e-10 37.6 0.032 48.0 4.8
pfu_aug1.0_184.1_36357.t1 12 10 LRR_8 602 660 0.0 353.4 1.7e-18 2.5e-15 55.9
pfu_aug1.0_184.1_36357.t1 21 17 LRR_1 602 623 4.3e-31 102.1 0.00083 1.2 9.4
pfu_aug1.0_184.1_36357.t1 16 12 LRR_6 602 619 8.8e-09 34.5 0.011 17.0 5.8
pfu_aug1.0_184.1_36357.t1 12 11 LRR_8 625 682 0.0 353.4 2.1e-11 3.1e-08 33.2
pfu_aug1.0_184.1_36357.t1 16 14 LRR_4 625 663 0.0 160.9 8.3e-09 1.2e-05 24.7
pfu_aug1.0_184.1_36357.t1 21 18 LRR_1 625 645 4.3e-31 102.1 0.0017 2.5 8.4
pfu_aug1.0_184.1_36357.t1 18 16 LRR_7 625 639 6.2e-10 37.6 0.024 35.0 5.2
pfu_aug1.0_184.1_36357.t1 16 13 LRR_6 625 639 8.8e-09 34.5 0.0008 1.2 9.4
pfu_aug1.0_184.1_36357.t1 16 14 LRR_6 647 660 8.8e-09 34.5 0.064 95.0 3.5
pfu_aug1.0_184.1_36357.t1 16 15 LRR_4 649 683 0.0 160.9 7.3e-06 0.011 15.3
pfu_aug1.0_184.1_36357.t1 21 19 LRR_1 649 671 4.3e-31 102.1 0.021 32.0 5.1
pfu_aug1.0_184.1_36357.t1 18 17 LRR_7 649 660 6.2e-10 37.6 0.016 24.0 5.7
pfu_aug1.0_184.1_36357.t1 12 12 LRR_8 672 731 0.0 353.4 1.5e-05 0.022 14.4
pfu_aug1.0_184.1_36357.t1 16 15 LRR_6 672 683 8.8e-09 34.5 0.038 56.0 4.2
pfu_aug1.0_184.1_36357.t1 21 20 LRR_1 673 683 4.3e-31 102.1 0.54 810.0 0.8
pfu_aug1.0_184.1_36357.t1 21 21 LRR_1 696 713 4.3e-31 102.1 0.0046 6.8 7.1
pfu_aug1.0_184.1_36357.t1 7 7 LRR_9 696 738 2.2e-12 46.9 0.028 42.0 3.6
pfu_aug1.0_184.1_36357.t1 18 18 LRR_7 696 709 6.2e-10 37.6 0.0085 13.0 6.5
pfu_aug1.0_184.1_36357.t1 16 16 LRR_4 697 714 0.0 160.9 0.0055 8.1 6.1
pfu_aug1.0_184.1_36357.t1 16 16 LRR_6 697 711 8.8e-09 34.5 0.047 69.0 3.9

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues
Dshape 1

Transcript
Transcript IDpfu_aug1.0_184.1_36357.t1
Definition- 
>pfu_aug1.0_184.1_36357.t1
atgactgaagaatactctaatgaaaatcttactaatgtttccaagggattatttctagcagtttgtggtatagttggacc
agaatgcattgtagagcaacgacggcagaaatggggcatgtatgaattgttaacatcatgtgatatatcattccctgcaa
caattatgcccagtggaagtacagctgagggattcaatttcaaatcatcagatattgacatcatgtgtattttcaaagac
attgtggtccataataatacatattatcatacatcgaatatagcagacgttcctacggtagtagtgatggaaacagaaaa
cgtgtctccaggtttcacattactcagatgtttaagatatagcaaagtattcgagggattcatgatcattgggaacaatg
tctattatagcacacaagttgatgtggcatctactcaccgcatgatgacgcaaacaaaacagtttattgaagaggaagga
agctacacacatataatgaaattgaccatatatggcgacggaagcggaagtgcaccccgaggagacgatcagtctatagg
tagataccgcgctgcactcatctccgatacccagatccggtacatcgacaaggaatcttttaagagtgtcccagggttaa
cagaactgaccatgtttggaaacaacattggtatcctctatccgtatattttctatcatctcaagtccctcgaaattttg
aatttaccaaacaacaacatacgtcatttgtctgctgcggtattcagtggtctgtcaggtctcagagaactccgtctgtc
tgataatctaatccggttcctaccaagcacaatgttcaactttttaccgaatctgagaatattgaatcttaatggcaaca
agataagattcatccaaagagatctgtttcaaaaattatcaaaacttgaaattttggacttgtcgaggaacaacattacg
gatttatacgataccgtatttgactctaacaccgagcttcgagagctattgctaaatggaaacagactttggaaaattcg
tccaagatggttccgtaacctccagaatctgagaagtttttctttgagtggaaacacaatcagagtagtagagtcgggcg
ccttctccaatcttgtgaacttacaggaacttttgttatcagccaatcatattgtgcgaatacaagacggcgcatttgaa
catttacgcgaattgcggatacttgatttagcgacaaacgacattgaagagattccaccttcgctatttttgtatcttga
ttcgctcgaagaactatatcttggaacaaataatctgaagatcatccgaaatggcacatttagtgcagcaagaagtctca
tcagattagatctttcgagaaatacaatttcttacatcgacccgggagctttgcgtccacttaaaatgctccagtatttg
gacttggcacacaataagttcaccaccatgagaagtttcatgatattcggcttggacgaattgaaggagatcaatttaga
acataatttcattaacactatagaaacggatacgttcaagacttcctctgttagttatctgtccaaagtgtccgtcctta
atctgaagagcaacaacttacgtaaattagatgctgacagtttacaaggacttccgcaccttaaatcacttgaattagga
aataataaattgaaacgagtacacagcttagcattcgccaatgtcggaaatcttaggacacttgaattgcaaaacaacaa
aatcaaaagattaagtaacgggatttttacaagcttacatagacttttggaacttgatttgtcttccaacaagatacgta
cggtagggtccgatgcattccaaggacttgacaatttggaggatttagatatgagttcaaatggcatccatgacattgat
gaaaacagcttccggccattgagaagtttgacaaatcttaatcttcgcggaaatagactgttgagttttaattttactct
tgttaccaagtttcctcagttgtcttcacttgacctcagcgaaaattacatgttttggatagacattcaggaaggtacga
aactacgtctgaaagaactaaaccttaacagtaaccaccttaaaacggtcggatctgacttaacgcaaataatgtccagc
tcatcctatgtttcattcaccggaaacccactggcatgtgactgccatctaagatggcttctggatccgggactgtcgag
taaaacaagaatagaaaatatggatgacgtcgtctgcaagacgccaaataagttacacggaagaagggtgagtcacctga
tggaggaagatctgatatgcgatacacaagagctacaaaaagatcagccttctatgatatgcgatgaaatgacgtttaca
cagaaacaacactatgattctaggtttggaaacaaagccgcagtttctcgacatgtgacgatatttacagaaaacaacga
gcctcttgcaaatggagttatgctgaatgacgattgggccttaacgattggcagtcatttcaaatcttcccgcacaaata
gattgaaagtcaggattggtcggagtaaaaaaccacgtgatatcgtcagcatcattcgtcatccattggttgccatgaat
atgcagcaatataacgtagccgtggtgaaattggcatccaggaagaaaggaaaatcaacaactatcccatgttttctgac
ttataaacaatttgcctctttatccaaaattgtaccacgagtgatggttacaacacgaataagtggaaagaaattgttct
caaaactcaaaccgaaaaagggtcgattaagcactgggtgcaaaaataaagattttgtatgtgcaaaaatcaagaattcc
aagaaaagtgataaacctttaatgatgataaatggttcgccaatgtacctaggcaaagcaagtcattctcgcttggctgg
gataggcatagacattggcatgcctagtacgtatgaatataacttcattcctatctggtctgtatcagactgggtatcca
ccgtcatgcaggagtttgacaacaagtgtaatgtagacaaatatggaaatcctaattgctcaggacttaatctgcccaca
ctgaacgatatgatccagaaattacagcctatggagcaacattaa

Protein
Protein IDpfu_aug1.0_184.1_36357.t1
Definition- 
>pfu_aug1.0_184.1_36357.t1
MTEEYSNENLTNVSKGLFLAVCGIVGPECIVEQRRQKWGMYELLTSCDISFPATIMPSGSTAEGFNFKSSDIDIMCIFKD
IVVHNNTYYHTSNIADVPTVVVMETENVSPGFTLLRCLRYSKVFEGFMIIGNNVYYSTQVDVASTHRMMTQTKQFIEEEG
SYTHIMKLTIYGDGSGSAPRGDDQSIGRYRAALISDTQIRYIDKESFKSVPGLTELTMFGNNIGILYPYIFYHLKSLEIL
NLPNNNIRHLSAAVFSGLSGLRELRLSDNLIRFLPSTMFNFLPNLRILNLNGNKIRFIQRDLFQKLSKLEILDLSRNNIT
DLYDTVFDSNTELRELLLNGNRLWKIRPRWFRNLQNLRSFSLSGNTIRVVESGAFSNLVNLQELLLSANHIVRIQDGAFE
HLRELRILDLATNDIEEIPPSLFLYLDSLEELYLGTNNLKIIRNGTFSAARSLIRLDLSRNTISYIDPGALRPLKMLQYL
DLAHNKFTTMRSFMIFGLDELKEINLEHNFINTIETDTFKTSSVSYLSKVSVLNLKSNNLRKLDADSLQGLPHLKSLELG
NNKLKRVHSLAFANVGNLRTLELQNNKIKRLSNGIFTSLHRLLELDLSSNKIRTVGSDAFQGLDNLEDLDMSSNGIHDID
ENSFRPLRSLTNLNLRGNRLLSFNFTLVTKFPQLSSLDLSENYMFWIDIQEGTKLRLKELNLNSNHLKTVGSDLTQIMSS
SSYVSFTGNPLACDCHLRWLLDPGLSSKTRIENMDDVVCKTPNKLHGRRVSHLMEEDLICDTQELQKDQPSMICDEMTFT
QKQHYDSRFGNKAAVSRHVTIFTENNEPLANGVMLNDDWALTIGSHFKSSRTNRLKVRIGRSKKPRDIVSIIRHPLVAMN
MQQYNVAVVKLASRKKGKSTTIPCFLTYKQFASLSKIVPRVMVTTRISGKKLFSKLKPKKGRLSTGCKNKDFVCAKIKNS
KKSDKPLMMINGSPMYLGKASHSRLAGIGIDIGMPSTYEYNFIPIWSVSDWVSTVMQEFDNKCNVDKYGNPNCSGLNLPT
LNDMIQKLQPMEQH

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Okinawa Institute of Science and Technology
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