Gene
| Gene Model ID | pfu_aug1.0_1841.1_51430 |
|---|---|
| Locus | scaffold1841.1 : 42957 ... 46755 : - |
| To GenomeBrowser | scaffold1841.1:42957..46755 |
| Genes list of scaffold | scaffold1841.1 |
| Synonym | pfu_aug2.0_1537.1_24981 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1841.1_51430.t1 | 1 | 1 | Transmemb_17 | 13 | 94 | 3.0e-15 | 56.4 | 1.2e-18 | 1.8e-14 | 53.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1841.1_51430.t1 | gi|241835643|ref|XP_002415050.1| | transmembrane protein, putative [Ixodes scapularis] | 1.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| egg-Dshape | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1841.1_51430.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1841.1_51430.t1 atggatggtattttggatttttcttcctctgtgaggttcttantttttgcatttaaaggtgagaccttgccatatcccca aaacgtcctacccgcagaaattatactcttatttattttgactgctatcaaaggtaatctgacggagcgaggaataggtg tatttgtttctctattactgagtatcccagcatgccttggtgccgtatttctattgttgtggcagacgtacgttttaaga gttgatgtgatattagcagccattcagttagcattcattggattcgagttgatatttggccttatctccattataacatt tgcaagagcaactccatactga |
|
Protein
| Protein ID | pfu_aug1.0_1841.1_51430.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1841.1_51430.t1 MDGILDFSSSVRFLXFAFKGETLPYPQNVLPAEIILLFILTAIKGNLTERGIGVFVSLLLSIPACLGAVFLLLWQTYVLR VDVILAAIQLAFIGFELIFGLISIITFARATPY |
|