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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_18413.1_03911
Locus scaffold18413.1 : 9926 ... 20668 : +
To GenomeBrowser scaffold18413.1:9926..20668
Genes list of scaffold scaffold18413.1
Synonym pfu_aug2.0_27.1_23278

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_18413.1_03911.t1 gi|301607804|ref|XP_002933478.1| 0.0

Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 2
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_18413.1_03911.t1
Definition-
>pfu_aug1.0_18413.1_03911.t1
atgtacaacacttctacgttatcatcttctactcagatgtcaagtgctacagcaacaaagtatgagagacaaataaagaa
tctgaaagaagaaaatagcaagttgagaaaagacttacaaaacttacagagtttgtataatcagttgactgctgagaatt
ctcatgagaaatttgatgagaggcgaataacaatgttaaaatcccaagttatccagctagagagacaggttttattgatg
tcagaatcattgagttcccgttcagaggtactgttagaagtggagaatgccctatcatgcttagtagataagtggagata
ttatatagctgtggatgttaaggggccggaggtgggagtacagagagcagatatcacacaaatggtccataccgcagaat
cagccagaatcaagctgtataaaagtattgagaattcgaccacagagaaattaaacaggacagcaatactactggacgat
tttataaagccaggttgtcaaggggaaataactcttcttgatatagcctcagggaagctagatcaccttaaccttaagca
tgtgggaaagcttgagaccaaattagcatcattgtataaggagctgattggactgtatgaactgatgaatgaaggagaca
ggacaaatctggacaatcattatgcttcctcaagtcatgtgaccaatgttgctagggatcgccttggtaaccagatttta
aaatcctgtgctttgatgaaagactgctgtggagatcttacttctttatccttactatatcctgcagccccatggcctcc
tttcaagagaagtgccgttaaggatattacactagagagtgtactaaaggcattaccacctctacccaggggccgcacag
ctgatgttcacaaaacactggaggctttactgaaggcagttaactacaaacaccacatgatggaacaacaagtaaaagca
ttgaaagatgatgtaaaattccataagtcagtctacaacttacagctgtcatacatagaatctttattccatgcaatgaa
ggagggatatgaatatctagaaagatcaacagatgaagttattgttacaccattaaaagaaatcttggaagcatattcag
atctgaaggaaactgcaagtgaagaggctctcaagaatttcctcaccagttttgaacactcatttgaaaaaatggatcat
gctgtcaacaaacttagtctgcaccaagaaaatgttccttattgtgaacataatttaccaataaatttcatcgaatag

Protein
Protein IDpfu_aug1.0_18413.1_03911.t1
Definition-
>pfu_aug1.0_18413.1_03911.t1
MYNTSTLSSSTQMSSATATKYERQIKNLKEENSKLRKDLQNLQSLYNQLTAENSHEKFDERRITMLKSQVIQLERQVLLM
SESLSSRSEVLLEVENALSCLVDKWRYYIAVDVKGPEVGVQRADITQMVHTAESARIKLYKSIENSTTEKLNRTAILLDD
FIKPGCQGEITLLDIASGKLDHLNLKHVGKLETKLASLYKELIGLYELMNEGDRTNLDNHYASSSHVTNVARDRLGNQIL
KSCALMKDCCGDLTSLSLLYPAAPWPPFKRSAVKDITLESVLKALPPLPRGRTADVHKTLEALLKAVNYKHHMMEQQVKA
LKDDVKFHKSVYNLQLSYIESLFHAMKEGYEYLERSTDEVIVTPLKEILEAYSDLKETASEEALKNFLTSFEHSFEKMDH
AVNKLSLHQENVPYCEHNLPINFIE

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