Gene
| Gene Model ID | pfu_aug1.0_1842.1_51432 |
|---|---|
| Locus | scaffold1842.1 : 1 ... 15943 : + |
| To GenomeBrowser | scaffold1842.1:1..15943 |
| Genes list of scaffold | scaffold1842.1 |
| Synonym | pfu_aug2.0_803.1_11192 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1842.1_51432.t1 | 3 | 1 | fn3 | 8 | 50 | 1.1e-28 | 99.1 | 8.9e-07 | 0.0044 | 17.1 |
| pfu_aug1.0_1842.1_51432.t1 | 3 | 2 | fn3 | 74 | 157 | 1.1e-28 | 99.1 | 1.8e-10 | 9.1e-07 | 28.9 |
| pfu_aug1.0_1842.1_51432.t1 | 3 | 3 | fn3 | 172 | 259 | 1.1e-28 | 99.1 | 7.4e-17 | 3.7e-13 | 49.4 |
Transcript
| Transcript ID | pfu_aug1.0_1842.1_51432.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1842.1_51432.t1 tgccagatgtagcacctataattcgcttggctagtacaactcctacaagcatacagattgagtgggatgagcttaggcta ccagacagaaatggggtcattatcggctataaagtatattacatggccgagggggttaaatccatgaagatcgatgatgc acgcggaagtgctctttcccacaccatcacagcaatcctgaatcttacagtacctctaacacccgtggaccttgccattg ttccgatgacacctatctccgtcaacattacctggagacaactggctagcgaatacccagtcgtaagctacactctggtc tacaaaaggaacggcaatgtatccgaggaggagaaggccctcgtcatacaaattactgatccaaatgctcggttcttcac tgttggaaatctagttgaggacgctaactacgaattctgcctggttgccaacaacgagtttggatcttcaggacctgcta tagaagagtacttcaactctaaggaccctctgccgccaccacccaaaaatctcaagatcatcaacagaacttctactaac ttgtacctgaattggactcagcctaatccagcaattcaaatagattatttcgaagtgcggtaccatccctggatttttga aaaagacactcaacatgatagagtgattcaaaaagtcagcaccaagattggtatgcaaattgtctccttacgaccataca ccttttatcagattgacattcgtgcaatgacaaacaagggacgctggagtaaatggagtaactctgtgattgaacataca ctagaagatcgttcttccacctctatgaagttacaggaaaagttaaatggaaagttaacaatccgtctgaaggcctgtac aagtgttggccctggtccttttactgctgctgtagagctggacaacggcactacagcgtcaagaacaaaagaattgaatc cctggcatgatcaaagactgagtatcatagtcggcgttgccatagcaattctttgtatcgtcatctgtattataatcatt cttcttcgcaacagatgtgtatcaaacagttatccacatactcagcgagctctggtccacggtaatggccatatgccaat acagggaaatggacatgtagtggatggaaggggtgtcaatgctttccaacttgagacaatgacaccaatgttaactagag atggtgaaaatgaacagtctgactcaaagggttgtggcagcggtaatttaattgttactcctaatggcacaaggattaat ggatatgttccattcaaaaatgggatgagaaacgcccatacccctaatggtcgtgtgacgcatcatatctaccgagaaaa tgcatatccagaggaatcatgtggtctcatagcagccatgttgtcagggactgatagaattcatacctcagaggaagata aaaatacctcaaaatcaccagagcgtgactccctgttagatggtatagaccaaagtctggagtcttcgctggaggagggg ggaggggaccacacatgtgacatgcagctacctcatacctcccctattaaccaagggccacagagtatagctaaccacag tacctcaataacacacaattcttcaggtgacttttcaagtagtgctcacaataaagcagctgttgacggcatggtgaacg acatgccggccaacatggaaaaccgtgatggttgtaacgcctccgtagatataacctcgccatctctcaggaatacacat agttcctgttcaaatcaactctctacctcatttaacggtcatccctcggatgaccctcactgtctggataccaaaagggc aagtgctgggaatcggccctcggatcctcattcagaaaacctcagagacacttctatacctcaggaactctataaatctc ctaaccaggagacctcatttgtacaacatgctaacctcagtggaatcttgaacgataatggagtcaaatcaaatgggctg aaggcttgtaaccttcaggaggtagtacccagtggggacaccaaagaaggtcaaaggtcaaattgtcaccctcagggaat gcccaagctttgccacaacggagataaagccacgatgtctacgtgtaattctcaagcatcggagaaacaacgcttgttgt ctatattacctcaggaaaacaaggggaagagatttcaatcagtgccctggaatgaagttagcgtataa |
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Protein
| Protein ID | pfu_aug1.0_1842.1_51432.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1842.1_51432.t1 PDVAPIIRLASTTPTSIQIEWDELRLPDRNGVIIGYKVYYMAEGVKSMKIDDARGSALSHTITAILNLTVPLTPVDLAIV PMTPISVNITWRQLASEYPVVSYTLVYKRNGNVSEEEKALVIQITDPNARFFTVGNLVEDANYEFCLVANNEFGSSGPAI EEYFNSKDPLPPPPKNLKIINRTSTNLYLNWTQPNPAIQIDYFEVRYHPWIFEKDTQHDRVIQKVSTKIGMQIVSLRPYT FYQIDIRAMTNKGRWSKWSNSVIEHTLEDRSSTSMKLQEKLNGKLTIRLKACTSVGPGPFTAAVELDNGTTASRTKELNP WHDQRLSIIVGVAIAILCIVICIIIILLRNRCVSNSYPHTQRALVHGNGHMPIQGNGHVVDGRGVNAFQLETMTPMLTRD GENEQSDSKGCGSGNLIVTPNGTRINGYVPFKNGMRNAHTPNGRVTHHIYRENAYPEESCGLIAAMLSGTDRIHTSEEDK NTSKSPERDSLLDGIDQSLESSLEEGGGDHTCDMQLPHTSPINQGPQSIANHSTSITHNSSGDFSSSAHNKAAVDGMVND MPANMENRDGCNASVDITSPSLRNTHSSCSNQLSTSFNGHPSDDPHCLDTKRASAGNRPSDPHSENLRDTSIPQELYKSP NQETSFVQHANLSGILNDNGVKSNGLKACNLQEVVPSGDTKEGQRSNCHPQGMPKLCHNGDKATMSTCNSQASEKQRLLS ILPQENKGKRFQSVPWNEVSV |
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