Gene
| Gene Model ID | pfu_aug1.0_1842.1_51436 |
|---|---|
| Locus | scaffold1842.1 : 48057 ... 62365 : - |
| To GenomeBrowser | scaffold1842.1:48057..62365 |
| Genes list of scaffold | scaffold1842.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1842.1_51436.t1 | 1 | 1 | Ig_2 | 72 | 152 | 9.7e-10 | 38.4 | 9.0e-13 | 1.9e-09 | 37.5 |
| pfu_aug1.0_1842.1_51436.t1 | 2 | 1 | I-set | 79 | 152 | 1.5e-16 | 60.0 | 1.4e-18 | 2.9e-15 | 55.8 |
| pfu_aug1.0_1842.1_51436.t1 | 1 | 1 | ig | 80 | 137 | 2.2e-06 | 27.7 | 2.9e-09 | 6.2e-06 | 26.2 |
| pfu_aug1.0_1842.1_51436.t1 | 1 | 1 | Ig_3 | 80 | 139 | 3.0e-06 | 27.6 | 6.0e-09 | 1.3e-05 | 25.6 |
| pfu_aug1.0_1842.1_51436.t1 | 2 | 2 | I-set | 183 | 205 | 1.5e-16 | 60.0 | 0.088 | 190.0 | 2.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1842.1_51436.t1 | gi|62859421|ref|NP_001015894.1| | fibroblast growth factor receptor 1 precursor [Xenopus (Silurana) tropicalis] | 3.0e-14 |
Transcript
| Transcript ID | pfu_aug1.0_1842.1_51436.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1842.1_51436.t1 atggccagaagcgaaaaacgagaaaaagctgtactggattactattttagaatgcgtcttcagaacgaaaacatagatca gagttctcatttttttgatattatggaaaaatctgttcacataccggacgaggtcgaagatgtagagaaaagaccatccc gcaacattgaaggtaaaccaagatggcggaacttcaataaaatggaagactaccagtccttgccgacacatgtcaaggca gaattgagatgtccagcatgcggaacaccaaaacccaacattacgtggtacaagggacacgaacgtctcattgtaaattc tagaacaaggaacaaataccgtacacggggatggaagctatacatagactccctgaatgtccgagacgaggggaaataca catgtgtggtagagaacaagtttgggaagattaattacaccatagaaatcaatgtcatcgaacagatcaatctgcagcat ggaccagacatgcacttcggatactttaccctcgtcaattatcccgaatccaataaagtgaaatgtggccaaagactgaa gactatgaaagttaaaatttcattcgcatacgacttcaaatgtgattttgaaggcatgtttccaagaacttttggaacgg ccctcgtagaccgtcatagagtcctgttgatcattcatcgtcttgaattctaa |
|
Protein
| Protein ID | pfu_aug1.0_1842.1_51436.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1842.1_51436.t1 MARSEKREKAVLDYYFRMRLQNENIDQSSHFFDIMEKSVHIPDEVEDVEKRPSRNIEGKPRWRNFNKMEDYQSLPTHVKA ELRCPACGTPKPNITWYKGHERLIVNSRTRNKYRTRGWKLYIDSLNVRDEGKYTCVVENKFGKINYTIEINVIEQINLQH GPDMHFGYFTLVNYPESNKVKCGQRLKTMKVKISFAYDFKCDFEGMFPRTFGTALVDRHRVLLIIHRLEF |
|