Gene
| Gene Model ID | pfu_aug1.0_1843.1_37145 |
|---|---|
| Locus | scaffold1843.1 : 1 ... 31535 : + |
| To GenomeBrowser | scaffold1843.1:1..31535 |
| Genes list of scaffold | scaffold1843.1 |
| Synonym | pfu_aug2.0_219.1_30448 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1843.1_37145.t1 | 28 | 1 | Sushi | 3 | 15 | 0.0 | 562.7 | 0.41 | 2000.0 | -0.9 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 2 | Sushi | 23 | 73 | 0.0 | 562.7 | 2.8e-09 | 1.4e-05 | 25.3 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 1 | CBM_14 | 44 | 56 | 3.5e-06 | 26.8 | 0.66 | 3200.0 | -1.9 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 3 | Sushi | 81 | 128 | 0.0 | 562.7 | 1.8e-09 | 8.8e-06 | 25.9 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 4 | Sushi | 138 | 188 | 0.0 | 562.7 | 1.1e-07 | 0.00056 | 20.1 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 5 | Sushi | 196 | 244 | 0.0 | 562.7 | 3.2e-09 | 1.6e-05 | 25.1 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 6 | Sushi | 254 | 302 | 0.0 | 562.7 | 5.6e-10 | 2.8e-06 | 27.5 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 7 | Sushi | 327 | 376 | 0.0 | 562.7 | 1.1e-10 | 5.5e-07 | 29.8 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 8 | Sushi | 384 | 433 | 0.0 | 562.7 | 6.2e-10 | 3.1e-06 | 27.4 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 9 | Sushi | 441 | 490 | 0.0 | 562.7 | 8.7e-11 | 4.3e-07 | 30.1 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 2 | CBM_14 | 465 | 496 | 3.5e-06 | 26.8 | 0.47 | 2300.0 | -1.5 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 10 | Sushi | 498 | 547 | 0.0 | 562.7 | 5.3e-10 | 2.6e-06 | 27.6 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 11 | Sushi | 555 | 605 | 0.0 | 562.7 | 4.6e-09 | 2.3e-05 | 24.6 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 12 | Sushi | 613 | 663 | 0.0 | 562.7 | 6.6e-11 | 3.3e-07 | 30.5 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 13 | Sushi | 671 | 720 | 0.0 | 562.7 | 1.2e-09 | 5.7e-06 | 26.5 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 3 | CBM_14 | 695 | 726 | 3.5e-06 | 26.8 | 0.98 | 4800.0 | -2.5 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 14 | Sushi | 728 | 776 | 0.0 | 562.7 | 2.7e-09 | 1.3e-05 | 25.4 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 15 | Sushi | 785 | 834 | 0.0 | 562.7 | 2.4e-10 | 1.2e-06 | 28.7 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 16 | Sushi | 842 | 891 | 0.0 | 562.7 | 3.2e-08 | 0.00016 | 21.9 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 17 | Sushi | 899 | 948 | 0.0 | 562.7 | 3.7e-10 | 1.8e-06 | 28.1 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 18 | Sushi | 956 | 1005 | 0.0 | 562.7 | 9.9e-11 | 4.9e-07 | 29.9 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 4 | CBM_14 | 981 | 1010 | 3.5e-06 | 26.8 | 0.64 | 3200.0 | -1.9 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 19 | Sushi | 1013 | 1062 | 0.0 | 562.7 | 2.8e-10 | 1.4e-06 | 28.5 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 5 | CBM_14 | 1028 | 1066 | 3.5e-06 | 26.8 | 0.068 | 330.0 | 1.2 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 20 | Sushi | 1070 | 1126 | 0.0 | 562.7 | 9.2e-09 | 4.6e-05 | 23.6 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 21 | Sushi | 1130 | 1182 | 0.0 | 562.7 | 1.7e-09 | 8.2e-06 | 26.0 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 6 | CBM_14 | 1156 | 1187 | 3.5e-06 | 26.8 | 0.43 | 2100.0 | -1.3 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 22 | Sushi | 1189 | 1239 | 0.0 | 562.7 | 8.2e-11 | 4.0e-07 | 30.2 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 7 | CBM_14 | 1215 | 1246 | 3.5e-06 | 26.8 | 0.53 | 2600.0 | -1.6 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 23 | Sushi | 1248 | 1296 | 0.0 | 562.7 | 1.0e-11 | 5.0e-08 | 33.1 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 8 | CBM_14 | 1264 | 1303 | 3.5e-06 | 26.8 | 0.03 | 150.0 | 2.4 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 24 | Sushi | 1308 | 1327 | 0.0 | 562.7 | 0.00021 | 1.0 | 9.7 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 25 | Sushi | 1331 | 1381 | 0.0 | 562.7 | 4.0e-09 | 2.0e-05 | 24.8 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 26 | Sushi | 1390 | 1433 | 0.0 | 562.7 | 4.5e-05 | 0.22 | 11.8 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 9 | CBM_14 | 1412 | 1442 | 3.5e-06 | 26.8 | 0.019 | 96.0 | 3.0 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 27 | Sushi | 1443 | 1492 | 0.0 | 562.7 | 2.0e-05 | 0.1 | 12.9 |
| pfu_aug1.0_1843.1_37145.t1 | 28 | 28 | Sushi | 1500 | 1553 | 0.0 | 562.7 | 7.6e-08 | 0.00037 | 20.7 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 10 | CBM_14 | 1524 | 1560 | 3.5e-06 | 26.8 | 0.23 | 1200.0 | -0.5 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 11 | CBM_14 | 1566 | 1617 | 3.5e-06 | 26.8 | 7.1e-10 | 3.5e-06 | 26.8 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 12 | CBM_14 | 1631 | 1663 | 3.5e-06 | 26.8 | 8.7e-06 | 0.043 | 13.7 |
| pfu_aug1.0_1843.1_37145.t1 | 13 | 13 | CBM_14 | 1707 | 1727 | 3.5e-06 | 26.8 | 0.031 | 160.0 | 2.3 |
| pfu_aug1.0_1843.1_37145.t1 | 1 | 1 | Laminin_G_3 | 1774 | 1917 | 4.9e-07 | 30.1 | 2.3e-10 | 1.2e-06 | 28.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
| mantleEdge | 2 |
| mantlePallium | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1843.1_37145.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1843.1_37145.t1 agttgacagaacacaatgtttggataccggcatgtggtctgatttcaacctctattgcagacccgattgtggaactccac ctgatgtcttgtatgcgacatactcgagtgatggtacgacacttgagggaaacaccgtattctacacttgtgctgacaat acggtagcagagggtatcgcaaagacgacttgtctgatctccggagattggtctgcgctggacctctattgtagacctaa ctgtggtaaacctccaaagatacgatacgcaagttataccgccttgagaactttagagggagatgtggcttcatattctt gtggagataatacagttgtagagggtgaccaggagagcacgtgtctaaagaatggctcatggtcacatatcaatatctac tgtagacctgactgtggttcgccgccaaccactcaatattcttcttacgtcagtacgcgttcgactttggaaggtgatgt cataacctatacctgctcggccgaaacagtagccgaggggaatgcacaagtagtatgcttagagacgggctattggtcag acttcgacttttactgtagaccggattgtggtcctgctccttctgtcaaacatgctatctacacaagctcaggatcaaca cttgagggcgatgttgtgacgtatacatgtcgtgaacatactgtcacagaaggcttagcacagacaacttgccttgtaaa tggatcatggtctatgtttgacctgttctgtaggcctaattgtgggaaaccacgaaggatacaatatgcaagttacactg cgcctagaactttagagggtgatgttgctacatattcctgtggagataacacagttattgagggaaatcatgaaagcacc tgcctaaacaatggaacatggtcttacattaacgtctactgtagacctgttcatttcatgagaactaacaatatccttca cgtttatctaaaagcgaattgcggtatgccaaaagatatagaaagagcaacattgaaaccaggattaactacctatggca caataagagaatatgtttgtgatgccggaagcgtcatggaaggaaatccgacaacagtctgccaagaaaattttgattgg acgccaaccgatctgtattgtcgccctgattgcggtacaccgcctattgtaagatatgcaactcataacggtggccgtac tctagaaaatgatgtcatatcttatacctgtcaatcgaatactgtgtcagaggggataggagaaacaacatgtctgaata atgggtcatggtcctattttgacctgtactgccgacctaattgtggtgtacccatggacattccccgtgctgttgtatca gaaggcttaacaacgtatggcacgacaagaaattatatatgttttaccggaacagttatggagggcgatccaacgataac atgtcaagaagactttacatggtcaaaaactgacgtgtactgcagaccaaactgtggcatcccaatggatataccgagag ctgttctacagcctggaaatactacatatggcagtatccgggaatacgtttgtgcttctggatctgttatggagggtaat ccaaatatcatttgtcgtgaagacttctcatggtctacaactgacctatactgcagacctaattgtggcaatcctccatc ggttcgatacgcctcctatgacgaggaatcacagactcttgaagaagacgtcataacgtacaggtgcaacgaagatacag aactcgagggaacgtatcaaacaatctgtcaaaagaatgggacttggtcatattttgatatctactgcagacctagttgt ggaaatccaccagttgttcgatatgcaagttatggtagtggagtgcgtactctggaaggagaccgagttgtttatacatg tgatgctaacacagttctagaaggaaactcggaaacaacatgcttgccagacggttcttggtcagagtttaatatctatt gcagaccaaactgtggtatccctatggatattcaaagggcggcattgaaacctggacagacaacatacggtactatccga gaatatgtttgcgcttcaggaactgttatggaagggaatccaaacattgtttgccgagaaaatttcacatggtcttcaag tgacctctattgtagacctaactgtggcagaccaccgctcattccaaatgcgtccttcctcaatgcaagaacgcttgaag gcgacattgtccaatacacatgtgccgttggaactgttgctgaaggaataacaacaactacgtgccgaagcgatgggaca tggtctgctgttgacctatattgtcgacctgattgtggggatcctcctatgattcgatatgcatcttacgacgaaggtcc aacgttggagggtgacgtcattatatattcctgtggagacggcactgtgttggaaggaatacatgagactacttgtatga aaaatggatcctggtcttatttcaatatttactgtagacctaactgtggaatgcccatgaaaatacagcgagcaaaaata cttcccggacttacaacgtatggttccatccgtgaatatgtatgcaatgaagggacaattatggaaggcaatcccaaaat tatgtgcaaggacaattttaaatggtcttcaaccgatctctactgcagaccgaactgtggcagacctcctacggtaccaa gatcaacatattcaaatgccgggacacttgaaggtgaaactgttgagtatgactgtataggaaacactgtgttggaaggt caagcattcacaacatgtctatccaatgggagctggtcatattttgacctgtactgtcgacccgactgtggtataccgat ggatgtacctcgtgcttttttgaagcctggtctaactacgtatggggctactagagagtacgtctgtatggaaggctcga gaatggaaggagacccggacattgtctgtggtgaaaactttatgtggtctaattccaaattctattgcagacttgattgt ggagaaccaccgaaagttccttatgcacaagtacatcaaggacctaatcaagacggaaactctctattctatgtctgtga tgatacatacatacaagagggtgatggagaaattaaatgtttagataatggaacatggacaaagaacaatgtattttgcc gagcccagtgtgggaagcccatgttgccacgatttgcccgtcttgacatgtacccaggaccacttataggtggtaccaaa ttaagacttgcttgttcatctggtagtgttccaaactacggcgatcccaatatcatatgtcaagacgacggaacgtggag taaaccggaactaaaatgcacacctgactgtggactaccgatggtgatgccaaatgctaagttagcagcaccgctagcat cgtctttagaaggggcaagatttagttatatatgtgacgatggcacagttcctactggaactaccgagtctgtttgtacg gctgatgggtcatggtcacctgtaaactttttctgcaaacctgactgtggtctccctatggccttgccacacgcccactt ggcgatgccaccagcatcaactttagaaggtgctgaactgcgatatatttgtaaagatggttctgttcctgaaggcacat tcacatctgtttgcacagcagatggaacatggtcacccattagcttttcatgcaaaccaaattgtggcgatccaccgaaa gttccctacgcacaagttcatcaaggacctaacaaggacgggagttctttattctatgtttgtgacgatacctacgtaca ggagggtaatggagaaattgtatgtttagaaaatggaacatggtcgaagatcaacgtattttgtcgattgtcccctaact acggtgatccaaacattatatgtcaggaagatggaacatggagtaaaccgacactgaagtgtactcctgactgtggctta ccgatggccttaccaaatgctcgtttagcagctccgccagcatcaacattagaaggtgcagaattgcgttatgtttgtga agatggttctattccaacaggcactttcacttcagtatgtacagctgacggcacgtggtcacctatcaactttttctgta gaccgaactgtggaaaaccatccgagattcttggtgctactattacatatgaaaatgacggaatggttgcccgatacaca tgtgactacggctcctggacaacagttgtgtgtaggagtgatggaacatggtcacctactgatttttattgcagatctga tgctgattgtggaccacctccaaaaatccttagagcttcgatagttgtggcgtcttcattgtctggtagctttgcaacat atacctgtgatccggacactattccagatggaaatggcaccgtattctgtcgaccagatggaacttggcccaagcctaat ttcttttgtaaagctgactgtggtaatccaccgacgattcaaggcgctatcctctccgctggttataatactgagggcac aaagagaatgtattcttgttctgctttgaatgaggaatttggtaataaggtcattatgtgtcaaaataatggaaaatgga ccagaaccaactttagatgtgtccatccatgtgacgactgtataatcaggaatggtgtaggatttaatcctcatcctaat gactgtgctaaatttacacattgtgtacggggagccgacaacaaaatggtagctacatttagatcctgtccttttagtca atattgggatcagactgtgttgacatgtagaaaatccgaggatgtgccgtgtatacatgaaaaatgcagagcgtatatga ggacgcatcctatgacaaacacagataattgtagggcatattggcagtgtaagaagggaatatctattggtacttgctgt aaagaaggacaaatgtacgttcctaataaaggctgcattagggaccttataggtgtatgtagtgatgcatgtccaccggt gacgtatgaacattcgtcatgtgatagcagagagattactggtgatcctaaaagatatgaaagatacatacctggtcaag gctgggtaaaaatgccctgtccaatgggaactcactatcagcatagctcctgtggatgcgcagtccatgtatctttcaaa aatgaaaccacccaagcagtttgcagaccggaactgtaccttccatttgatactgacttgcgggacaagtccggaaataa cctccacgtagaaaatcatggagtcgtgatacgggaaggtgcggcgtatttcaatggacaagcacaactagtgattccga gattttctagtttccagtacagagacttggttatcacgatgaaattctacgaaaatccaccgactggaaatttggtgccc ctgatgagtaacagtaatttctgtaaatcaaatatctctttggcattgataaagagtaagcaaagtattcatttctttgc taaactggacactggcaagtcaacgacctttggtcttcctatgaaagttgggaagtggaaccaggtatattacgtacatg atggacaaattctagaaggttcaagtaatggtatgaaggcggagaaaagtgctattgggaaattacaatcaacacatacc cctatacatataggatttggaaaaggaagatcaaaatttaaggggtacatggacgagatcgccatttattcgtgccgtcc atccttcttataa |
|
Protein
| Protein ID | pfu_aug1.0_1843.1_37145.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1843.1_37145.t1 VDRTQCLDTGMWSDFNLYCRPDCGTPPDVLYATYSSDGTTLEGNTVFYTCADNTVAEGIAKTTCLISGDWSALDLYCRPN CGKPPKIRYASYTALRTLEGDVASYSCGDNTVVEGDQESTCLKNGSWSHINIYCRPDCGSPPTTQYSSYVSTRSTLEGDV ITYTCSAETVAEGNAQVVCLETGYWSDFDFYCRPDCGPAPSVKHAIYTSSGSTLEGDVVTYTCREHTVTEGLAQTTCLVN GSWSMFDLFCRPNCGKPRRIQYASYTAPRTLEGDVATYSCGDNTVIEGNHESTCLNNGTWSYINVYCRPVHFMRTNNILH VYLKANCGMPKDIERATLKPGLTTYGTIREYVCDAGSVMEGNPTTVCQENFDWTPTDLYCRPDCGTPPIVRYATHNGGRT LENDVISYTCQSNTVSEGIGETTCLNNGSWSYFDLYCRPNCGVPMDIPRAVVSEGLTTYGTTRNYICFTGTVMEGDPTIT CQEDFTWSKTDVYCRPNCGIPMDIPRAVLQPGNTTYGSIREYVCASGSVMEGNPNIICREDFSWSTTDLYCRPNCGNPPS VRYASYDEESQTLEEDVITYRCNEDTELEGTYQTICQKNGTWSYFDIYCRPSCGNPPVVRYASYGSGVRTLEGDRVVYTC DANTVLEGNSETTCLPDGSWSEFNIYCRPNCGIPMDIQRAALKPGQTTYGTIREYVCASGTVMEGNPNIVCRENFTWSSS DLYCRPNCGRPPLIPNASFLNARTLEGDIVQYTCAVGTVAEGITTTTCRSDGTWSAVDLYCRPDCGDPPMIRYASYDEGP TLEGDVIIYSCGDGTVLEGIHETTCMKNGSWSYFNIYCRPNCGMPMKIQRAKILPGLTTYGSIREYVCNEGTIMEGNPKI MCKDNFKWSSTDLYCRPNCGRPPTVPRSTYSNAGTLEGETVEYDCIGNTVLEGQAFTTCLSNGSWSYFDLYCRPDCGIPM DVPRAFLKPGLTTYGATREYVCMEGSRMEGDPDIVCGENFMWSNSKFYCRLDCGEPPKVPYAQVHQGPNQDGNSLFYVCD DTYIQEGDGEIKCLDNGTWTKNNVFCRAQCGKPMLPRFARLDMYPGPLIGGTKLRLACSSGSVPNYGDPNIICQDDGTWS KPELKCTPDCGLPMVMPNAKLAAPLASSLEGARFSYICDDGTVPTGTTESVCTADGSWSPVNFFCKPDCGLPMALPHAHL AMPPASTLEGAELRYICKDGSVPEGTFTSVCTADGTWSPISFSCKPNCGDPPKVPYAQVHQGPNKDGSSLFYVCDDTYVQ EGNGEIVCLENGTWSKINVFCRLSPNYGDPNIICQEDGTWSKPTLKCTPDCGLPMALPNARLAAPPASTLEGAELRYVCE DGSIPTGTFTSVCTADGTWSPINFFCRPNCGKPSEILGATITYENDGMVARYTCDYGSWTTVVCRSDGTWSPTDFYCRSD ADCGPPPKILRASIVVASSLSGSFATYTCDPDTIPDGNGTVFCRPDGTWPKPNFFCKADCGNPPTIQGAILSAGYNTEGT KRMYSCSALNEEFGNKVIMCQNNGKWTRTNFRCVHPCDDCIIRNGVGFNPHPNDCAKFTHCVRGADNKMVATFRSCPFSQ YWDQTVLTCRKSEDVPCIHEKCRAYMRTHPMTNTDNCRAYWQCKKGISIGTCCKEGQMYVPNKGCIRDLIGVCSDACPPV TYEHSSCDSREITGDPKRYERYIPGQGWVKMPCPMGTHYQHSSCGCAVHVSFKNETTQAVCRPELYLPFDTDLRDKSGNN LHVENHGVVIREGAAYFNGQAQLVIPRFSSFQYRDLVITMKFYENPPTGNLVPLMSNSNFCKSNISLALIKSKQSIHFFA KLDTGKSTTFGLPMKVGKWNQVYYVHDGQILEGSSNGMKAEKSAIGKLQSTHTPIHIGFGKGRSKFKGYMDEIAIYSCRP SFL |
|