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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_18449.1_11133
Locus scaffold18449.1 : 13226 ... 15830 : +
To GenomeBrowser scaffold18449.1:13226..15830
Genes list of scaffold scaffold18449.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_18449.1_11133.t1 2 1 7tm_1 9 32 3.5e-11 42.7 0.075 1100.0 -1.6
pfu_aug1.0_18449.1_11133.t1 2 2 7tm_1 66 188 3.5e-11 42.7 2.4e-15 3.5e-11 42.7

Transcript
Transcript IDpfu_aug1.0_18449.1_11133.t1
Definition-
>pfu_aug1.0_18449.1_11133.t1
atgagtgctacgtacatgtacgccttattatatttcatctattcgtacattaaagcgatacatgtagaaatgtcgaatgt
tttggaaagtaatacatcttcttcagaagacttgttgaaatggaacaagtactacgctgaaagatttttcacttcgacag
tgtttgttagtgtcctcctgtcaataggaatccccggtaaccttcttgtggtcattgtttaccattttcgccttcgaaaa
gtgggaagtggcagatatttcataaagtatttggcagcatgtgacattatcggccttataataagcgggaccttaaatct
tatacggaatttacatcacgtgacttttcctggaaaagttacgtgtaagattttattgtttttaagctacagtatcactt
gtgcatcgttaacaattttggtgatcatcgccatacagcgatttttcatcatctgtttccatccgccaaaggaaatgtcg
catgcgctgcggcgatttatgttagcttttaagcgtcatattttcgctttccgcctcagcgccgattttacatttctatg
gtggattgccgattga

Protein
Protein IDpfu_aug1.0_18449.1_11133.t1
Definition-
>pfu_aug1.0_18449.1_11133.t1
MSATYMYALLYFIYSYIKAIHVEMSNVLESNTSSSEDLLKWNKYYAERFFTSTVFVSVLLSIGIPGNLLVVIVYHFRLRK
VGSGRYFIKYLAACDIIGLIISGTLNLIRNLHHVTFPGKVTCKILLFLSYSITCASLTILVIIAIQRFFIICFHPPKEMS
HALRRFMLAFKRHIFAFRLSADFTFLWWIAD

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