Gene
| Gene Model ID | pfu_aug1.0_1847.1_51446 |
|---|---|
| Locus | scaffold1847.1 : 18 ... 7995 : + |
| To GenomeBrowser | scaffold1847.1:18..7995 |
| Genes list of scaffold | scaffold1847.1 |
| Synonym | pfu_aug2.0_5721.1_06155 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1847.1_51446.t1 | 2 | 1 | A2M_recep | 67 | 67 | 1.5e-20 | 73.1 | 0.27 | 4000.0 | -2.0 |
| pfu_aug1.0_1847.1_51446.t1 | 2 | 2 | A2M_recep | 129 | 213 | 1.5e-20 | 73.1 | 1.0e-24 | 1.5e-20 | 73.1 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1847.1_51446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1847.1_51446.t1 atgcacgcattcgaaaatttctgtcatcaaaattccttgaaatttcttaaacctatgtcagagttcgttcgagtaaccaa cggaggaatgggaagtgcccaaaatgtaagcattgatgtcgatgccgattccgaatcacatcacttcaatgtgaatacag gcaatcgcttagtcctccagagctttcaaccatcaaatgtccctacacaggtcaatatttctgcgacaggacaaggcact gcattggtgcaggtttcagtcaactacaatgtcaaggaacaagtcgaaaagcccgtctttattttaaatgtaacgatcac caatgaaacacttcatgcagtcacaacaaagacatgcacaagctataacggaaccggcgtgggatcagggatgtctatca tagaacacggtgttttatctggatttgaagtggacattgaagacgtcacagcaaatgtttatatcaaaaagatagaaaga gacgacaaaatgatcaacatctacttggatgagataactaccactccagcgtgtgtaacagtggtagcacagcgtacaac aatggtggccaaggtgaaggaggctccagttagagtgtatgactattataaaccaggacaccaagtaactgctttctacc ttccaaggactctgaaggacagctcatactgtgatgtctgcaaggaatgcaagtgtccgacgaaatctctgggacattca aacgtctga |
|
Protein
| Protein ID | pfu_aug1.0_1847.1_51446.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1847.1_51446.t1 MHAFENFCHQNSLKFLKPMSEFVRVTNGGMGSAQNVSIDVDADSESHHFNVNTGNRLVLQSFQPSNVPTQVNISATGQGT ALVQVSVNYNVKEQVEKPVFILNVTITNETLHAVTTKTCTSYNGTGVGSGMSIIEHGVLSGFEVDIEDVTANVYIKKIER DDKMINIYLDEITTTPACVTVVAQRTTMVAKVKEAPVRVYDYYKPGHQVTAFYLPRTLKDSSYCDVCKECKCPTKSLGHS NV |
|