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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_18501.1_61828
Locus scaffold18501.1 : 120 ... 10878 : -
To GenomeBrowser scaffold18501.1:120..10878
Genes list of scaffold scaffold18501.1
Synonym pfu_aug2.0_171.1_03747

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_18501.1_61828.t1 1 1 G-alpha 14 176 5.0e-38 130.8 2.09999e-41 6.2e-38 130.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_18501.1_61828.t1 gi|291231449|ref|XP_002735663.1| 0.0

Transcript
Transcript IDpfu_aug1.0_18501.1_61828.t1
Definition-
>pfu_aug1.0_18501.1_61828.t1
gggcaaaatggccgacattatcatgtcttgttgtatgtcggatcaagaaaaagaacagaaaaaccggagtcgaaacatag
ataaacttattgcaaaggaaaaggttcacttccgaagaacaattaaaattttactgctgggtgccggggaaagtggtaaa
agtacatttctcaaacaaatgcgaataattcacggacagaggttcgacgaagggactgttcgtgaatttaaaagtgtcat
atatggaaatgtagtaaagggaatgagagtgctaatagacgctcgtgaaaagcttggaattgcttggggagaggaagatc
atgtgaagtatggtagttttgtatttggctatgatccaagctgtaaattggatgaagcaagttttgctcagtacatagaa
cctatgcggcatctgtggaaagatgctggaatcatgcaggcatttgataggaggagagagtttcagttgggtgactcaat
acgatacttccttgatgacctggatcgtgtagcgcaaaagatttaccttatggattttggggtcaaaggtcaaggacaac
tttga

Protein
Protein IDpfu_aug1.0_18501.1_61828.t1
Definition-
>pfu_aug1.0_18501.1_61828.t1
GKMADIIMSCCMSDQEKEQKNRSRNIDKLIAKEKVHFRRTIKILLLGAGESGKSTFLKQMRIIHGQRFDEGTVREFKSVI
YGNVVKGMRVLIDAREKLGIAWGEEDHVKYGSFVFGYDPSCKLDEASFAQYIEPMRHLWKDAGIMQAFDRRREFQLGDSI
RYFLDDLDRVAQKIYLMDFGVKGQGQL

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