Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_18518.1_18547
Locus scaffold18518.1 : 16489 ... 52492 : -
To GenomeBrowser scaffold18518.1:16489..52492
Genes list of scaffold scaffold18518.1
Synonym pfu_aug2.0_265.1_17218

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_18518.1_18547.t1 12 1 Ank_4 106 141 7.84727e-44 147.3 0.0015 2.6 8.6
pfu_aug1.0_18518.1_18547.t1 8 1 Ank_2 108 195 0.0 273.7 8.5e-17 1.4e-13 50.9
pfu_aug1.0_18518.1_18547.t1 15 1 Ank 109 123 0.0 208.2 0.027 45.0 4.1
pfu_aug1.0_18518.1_18547.t1 12 1 Ank_5 117 138 2.5e-38 129.2 0.017 28.0 5.1
pfu_aug1.0_18518.1_18547.t1 15 2 Ank 127 168 0.0 208.2 4.0e-08 6.6e-05 22.5
pfu_aug1.0_18518.1_18547.t1 13 1 Ank_3 127 165 1.10002e-41 136.6 0.00046 0.76 10.2
pfu_aug1.0_18518.1_18547.t1 8 2 Ank_2 149 245 0.0 273.7 3.3e-20 5.4e-17 61.9
pfu_aug1.0_18518.1_18547.t1 12 2 Ank_4 152 191 7.84727e-44 147.3 1.8e-09 3.0e-06 27.6
pfu_aug1.0_18518.1_18547.t1 12 2 Ank_5 157 209 2.5e-38 129.2 4.0e-08 6.6e-05 23.0
pfu_aug1.0_18518.1_18547.t1 15 3 Ank 171 194 0.0 208.2 1.8e-07 0.00029 20.4
pfu_aug1.0_18518.1_18547.t1 13 2 Ank_3 171 194 1.10002e-41 136.6 1.9e-05 0.032 14.4
pfu_aug1.0_18518.1_18547.t1 12 3 Ank_4 181 216 7.84727e-44 147.3 0.0073 12.0 6.5
pfu_aug1.0_18518.1_18547.t1 15 4 Ank 205 216 0.0 208.2 0.23 380.0 1.1
pfu_aug1.0_18518.1_18547.t1 8 3 Ank_2 212 293 0.0 273.7 1.6e-14 2.7e-11 43.6
pfu_aug1.0_18518.1_18547.t1 12 3 Ank_5 215 245 2.5e-38 129.2 7.6e-08 0.00013 22.1
pfu_aug1.0_18518.1_18547.t1 15 5 Ank 216 246 0.0 208.2 1.9e-13 3.1e-10 39.3
pfu_aug1.0_18518.1_18547.t1 13 3 Ank_3 216 244 1.10002e-41 136.6 9.7e-11 1.6e-07 30.8
pfu_aug1.0_18518.1_18547.t1 12 4 Ank_4 218 288 7.84727e-44 147.3 8.8e-07 0.0015 19.0
pfu_aug1.0_18518.1_18547.t1 12 4 Ank_5 269 290 2.5e-38 129.2 0.00011 0.18 12.0
pfu_aug1.0_18518.1_18547.t1 15 6 Ank 269 291 0.0 208.2 4.7e-06 0.0077 15.9
pfu_aug1.0_18518.1_18547.t1 13 4 Ank_3 269 291 1.10002e-41 136.6 0.00022 0.36 11.1
pfu_aug1.0_18518.1_18547.t1 12 5 Ank_4 270 320 7.84727e-44 147.3 0.019 31.0 5.2
pfu_aug1.0_18518.1_18547.t1 12 5 Ank_5 305 318 2.5e-38 129.2 0.44 730.0 0.6
pfu_aug1.0_18518.1_18547.t1 8 4 Ank_2 309 376 0.0 273.7 2.4e-10 3.9e-07 30.2
pfu_aug1.0_18518.1_18547.t1 13 5 Ank_3 314 341 1.10002e-41 136.6 0.98 1600.0 -0.1
pfu_aug1.0_18518.1_18547.t1 15 7 Ank 315 345 0.0 208.2 0.0045 7.4 6.5
pfu_aug1.0_18518.1_18547.t1 12 6 Ank_4 328 367 7.84727e-44 147.3 9.8e-08 0.00016 22.0
pfu_aug1.0_18518.1_18547.t1 12 6 Ank_5 333 387 2.5e-38 129.2 3.4e-09 5.5e-06 26.4
pfu_aug1.0_18518.1_18547.t1 15 8 Ank 347 378 0.0 208.2 2.6e-06 0.0042 16.8
pfu_aug1.0_18518.1_18547.t1 12 7 Ank_4 347 390 7.84727e-44 147.3 1.5e-08 2.5e-05 24.6
pfu_aug1.0_18518.1_18547.t1 13 6 Ank_3 347 374 1.10002e-41 136.6 7.5e-05 0.12 12.6
pfu_aug1.0_18518.1_18547.t1 8 5 Ank_2 351 441 0.0 273.7 5.6e-18 9.2e-15 54.7
pfu_aug1.0_18518.1_18547.t1 15 9 Ank 381 411 0.0 208.2 8.3e-07 0.0014 18.3
pfu_aug1.0_18518.1_18547.t1 13 7 Ank_3 381 408 1.10002e-41 136.6 0.00019 0.31 11.4
pfu_aug1.0_18518.1_18547.t1 12 7 Ank_5 382 413 2.5e-38 129.2 1.4e-06 0.0023 18.1
pfu_aug1.0_18518.1_18547.t1 8 6 Ank_2 384 472 0.0 273.7 2.6e-14 4.3e-11 42.9
pfu_aug1.0_18518.1_18547.t1 12 8 Ank_4 395 433 7.84727e-44 147.3 9.9e-05 0.16 12.5
pfu_aug1.0_18518.1_18547.t1 12 8 Ank_5 403 440 2.5e-38 129.2 0.00015 0.25 11.6
pfu_aug1.0_18518.1_18547.t1 15 10 Ank 412 440 0.0 208.2 3.7e-06 0.0062 16.2
pfu_aug1.0_18518.1_18547.t1 12 9 Ank_4 416 470 7.84727e-44 147.3 1.2e-07 0.00019 21.8
pfu_aug1.0_18518.1_18547.t1 13 8 Ank_3 416 440 1.10002e-41 136.6 0.0005 0.82 10.0
pfu_aug1.0_18518.1_18547.t1 12 9 Ank_5 446 473 2.5e-38 129.2 0.01 17.0 5.8
pfu_aug1.0_18518.1_18547.t1 13 9 Ank_3 450 472 1.10002e-41 136.6 0.00064 1.0 9.7
pfu_aug1.0_18518.1_18547.t1 15 11 Ank 451 471 0.0 208.2 0.0029 4.9 7.1
pfu_aug1.0_18518.1_18547.t1 15 12 Ank 473 503 0.0 208.2 1.7e-09 2.7e-06 26.8
pfu_aug1.0_18518.1_18547.t1 8 7 Ank_2 477 536 0.0 273.7 3.5e-11 5.8e-08 32.9
pfu_aug1.0_18518.1_18547.t1 12 10 Ank_4 477 528 7.84727e-44 147.3 3.3e-08 5.4e-05 23.5
pfu_aug1.0_18518.1_18547.t1 13 10 Ank_3 477 501 1.10002e-41 136.6 0.012 20.0 5.7
pfu_aug1.0_18518.1_18547.t1 12 10 Ank_5 495 550 2.5e-38 129.2 4.9e-06 0.0081 16.3
pfu_aug1.0_18518.1_18547.t1 15 13 Ank 508 538 0.0 208.2 9.2e-05 0.15 11.9
pfu_aug1.0_18518.1_18547.t1 13 11 Ank_3 508 535 1.10002e-41 136.6 3.2e-05 0.053 13.7
pfu_aug1.0_18518.1_18547.t1 8 8 Ank_2 512 605 0.0 273.7 1.1e-07 0.00018 21.7
pfu_aug1.0_18518.1_18547.t1 15 14 Ank 546 554 0.0 208.2 0.056 91.0 3.1
pfu_aug1.0_18518.1_18547.t1 12 11 Ank_4 554 560 7.84727e-44 147.3 0.9 1500.0 -0.2
pfu_aug1.0_18518.1_18547.t1 13 12 Ank_3 555 566 1.10002e-41 136.6 0.51 840.0 0.7
pfu_aug1.0_18518.1_18547.t1 12 11 Ank_5 576 600 2.5e-38 129.2 0.57 940.0 0.2
pfu_aug1.0_18518.1_18547.t1 12 12 Ank_4 586 605 7.84727e-44 147.3 0.052 85.0 3.8
pfu_aug1.0_18518.1_18547.t1 12 12 Ank_5 588 604 2.5e-38 129.2 0.66 1100.0 0.0
pfu_aug1.0_18518.1_18547.t1 15 15 Ank 593 605 0.0 208.2 0.067 110.0 2.8
pfu_aug1.0_18518.1_18547.t1 13 13 Ank_3 593 605 1.10002e-41 136.6 0.54 880.0 0.7

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_18518.1_18547.t1 gi|291242235|ref|XP_002741014.1| 0.0

Transcript
Transcript IDpfu_aug1.0_18518.1_18547.t1
Definition-
>pfu_aug1.0_18518.1_18547.t1
gggaggtggccaagcttcagaatcaccttacccttcttcgggaagagtacgtgaaactacagaatcggctggcggaagtg
gagaagaaatatcaaatcgcctcagcatcatcaggccaggtcaacgaggacaatttcgtagctagacttttgaaaactat
atcggaactttttgataaagagttgtatagtgatctgaccctaaatttagaaggatccagacaaatccaggcccatcggt
ttgtgttggcagctcggagtgatcactggggcgtaaacgatttgtcacaagtgacacatttagacttaactgctgatgag
tttgcggcagagttcttgatagggaatcaggctgatgtgaacttgacaacccacctcgataaggagacgcccctccatat
ggtggcgtgttacaatcctgacgtcactagttcagagacgattagcggaatggcgaggatagctcagaaacttatactac
acggtgccgacccaaattatcaggacactgctggcagtactcctttacattgtgccgtgtttagtaagaatgaagaagtg
atgaaagtactactgaattctgggaagatgaaatttgaattgaagaactcagaaggtcatacagcattatggcttgcatt
acaacagggtgaaactccgctacatctagcatgtcagaatggtttgatacagctagcggaggtgttactggaaaggggag
ctaatcctaacgcccagaccctggtgccgtcccgacatgccggggagtcgtttgggatggagggagaggagtttccggta
tctcaacagacgcctttacatctcgccctagtgaataaacatagtcctatagtacagatctttcttcaacataaaattaa
ggcagcacacagtgaggatggattgaaaatcctaccaaacttcaatatcaaggactctgaaggtcaaaccgtactaggtc
tgtcgctatggagcagtctccatgacaatgcagcacagttgttgggggctggtgcaaatataaacgagaaaaataacgaa
ggattgaccttattgcaccaagccatagagaagcaggacactcagagtgccatgtttctgattgagcatcaggcagatct
gtccatcaaaacgaatgaatttgaaactccacttcagcatgccataaggcgccacctaccggtggttgtagacatactat
gtaaaaagggagctaacttgaacattcagaacaaagatggggtgtgtccattatggcaagccttggagtcgggccaggag
gacattgctcagatactggtgaagcatggctgtgatgttgatttgtggtcagaaggccctgataaatgccaacaaacact
gttacatagagccatagatgaaaacaatgaggctgtagcatgttttctcataaaaaaagatgggttatgtcccctacatt
tagcctgtacatggggactggagttgatagtacagtgtttgatggaacacaatgccaatgttaatgtcaaggtagacaac
aaggggttcaacttccttcacactgccatacagaaatcggatatagagagcgtgctgttcctgatcagtgtacatgccaa
cgtaaactcccctacccatcaatcctcggccttaatgccgttacatttagcagtaatagcagggggtcagacacctctac
acagcgtaggtcagtatggcaaggacaatgcagcggccatatttgagttatttagggaaagtatgccggagtatccactc
gataaacccgattcagagggaaatacagttttacttcttgcctatatgaatggtaacgatatgttatcacaagagccgcc
atggtctgaaggcgaaatctgtttagaatgtggagtcaaatttagtatcaaaacccgcaaacatcattgtctgagcatct
acagatgcacttacgccattgacggctgcatgttttattactgtggtattgagacttcttccattaccaagtga

Protein
Protein IDpfu_aug1.0_18518.1_18547.t1
Definition-
>pfu_aug1.0_18518.1_18547.t1
EVAKLQNHLTLLREEYVKLQNRLAEVEKKYQIASASSGQVNEDNFVARLLKTISELFDKELYSDLTLNLEGSRQIQAHRF
VLAARSDHWGVNDLSQVTHLDLTADEFAAEFLIGNQADVNLTTHLDKETPLHMVACYNPDVTSSETISGMARIAQKLILH
GADPNYQDTAGSTPLHCAVFSKNEEVMKVLLNSGKMKFELKNSEGHTALWLALQQGETPLHLACQNGLIQLAEVLLERGA
NPNAQTLVPSRHAGESFGMEGEEFPVSQQTPLHLALVNKHSPIVQIFLQHKIKAAHSEDGLKILPNFNIKDSEGQTVLGL
SLWSSLHDNAAQLLGAGANINEKNNEGLTLLHQAIEKQDTQSAMFLIEHQADLSIKTNEFETPLQHAIRRHLPVVVDILC
KKGANLNIQNKDGVCPLWQALESGQEDIAQILVKHGCDVDLWSEGPDKCQQTLLHRAIDENNEAVACFLIKKDGLCPLHL
ACTWGLELIVQCLMEHNANVNVKVDNKGFNFLHTAIQKSDIESVLFLISVHANVNSPTHQSSALMPLHLAVIAGGQTPLH
SVGQYGKDNAAAIFELFRESMPEYPLDKPDSEGNTVLLLAYMNGNDMLSQEPPWSEGEICLECGVKFSIKTRKHHCLSIY
RCTYAIDGCMFYYCGIETSSITK

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