Gene
| Gene Model ID | pfu_aug1.0_18572.1_47227 |
|---|---|
| Locus | scaffold18572.1 : 846 ... 14215 : + |
| To GenomeBrowser | scaffold18572.1:846..14215 |
| Genes list of scaffold | scaffold18572.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18572.1_47227.t1 | 1 | 1 | Usp | 14 | 156 | 9.3e-26 | 90.6 | 2.5e-29 | 1.2e-25 | 90.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18572.1_47227.t1 | gi|156388097|ref|XP_001634538.1| | predicted protein [Nematostella vectensis] | 1.0e-24 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_18572.1_47227.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18572.1_47227.t1 atggcagatacggcaataacaccctcctcccccgtgtccagaaatattgtgattggtattgatgatagctgtttctcaga atatgcatttaacttttacatggaaaacatcaaacgacccggtgataacatcatcctcgtgcatgttccagagcttaatg gggttgtacaggcacccgctcttttgactgaccctggagtcatcgcacaacttatcaaagaagaagaagaaagaacaaaa ctgttggttcagaagtattctacgaaaatgaaagaagggggtcttggtggaaagatgaagcagatgacggggaaagtagg tgaatccatcgtggaggcggctagagatgagaatgcagccttgattattgtgggaacaagggggatggggaagatgagac ggacattccttggcagcgtcagtgactattgtgtacatcatgcacatgtgcccgtcatggtgtgtcgtcataaagacctc atagatcagcatcatcaccatcatcatcaccattga |
|
Protein
| Protein ID | pfu_aug1.0_18572.1_47227.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18572.1_47227.t1 MADTAITPSSPVSRNIVIGIDDSCFSEYAFNFYMENIKRPGDNIILVHVPELNGVVQAPALLTDPGVIAQLIKEEEERTK LLVQKYSTKMKEGGLGGKMKQMTGKVGESIVEAARDENAALIIVGTRGMGKMRRTFLGSVSDYCVHHAHVPVMVCRHKDL IDQHHHHHHHH |
|