Gene
| Gene Model ID | pfu_aug1.0_18641.1_40074 |
|---|---|
| Locus | scaffold18641.1 : 1 ... 4315 : - |
| To GenomeBrowser | scaffold18641.1:1..4315 |
| Genes list of scaffold | scaffold18641.1 |
| Synonym | pfu_aug2.0_2374.1_15506 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18641.1_40074.t1 | 2 | 1 | Fork_head | 274 | 308 | 2.3e-20 | 72.4 | 0.036 | 530.0 | 0.7 |
| pfu_aug1.0_18641.1_40074.t1 | 2 | 2 | Fork_head | 658 | 747 | 2.3e-20 | 72.4 | 2.0e-23 | 2.9e-19 | 68.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18641.1_40074.t1 | gi|313232120|emb|CBY09231.1| | unnamed protein product [Oikopleura dioica] | 3.0e-16 |
Transcript
| Transcript ID | pfu_aug1.0_18641.1_40074.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18641.1_40074.t1 atgacaatagctcactttgaacttcgctcaggtcgaagctttattcaaagccattcactgagaagaagtcctttaatgaa gaaaaattcatatgccaagttcatccaagaggatatgttggagatgaaaaatgaaaacaatggtgagttgaagtccagtc atgaaaatagcaacttgaaaagaaagagggataaaaacacccaaggtgatgtaatcggagggagagaaaatttctgcaga ataacaggcaattcccctggaagctcaagcagcagtgacggaggtgatttgctaaaaacgatgaacgagcctttgtttac cgatttcttcataaagaagagaaaactggaatcttcagatggccaaagtactccaagttccagtccctcacaagattcat cagaagataattcactattggagaattccccagaagacagaaggcaaaatgcagataccgtcaactcaagggacatggaa gaatcactggacatgaactttcaacaacacaaaaagtacagatttcaaaattctctagattatctatctgcaagaaagtt ctctaggggaatgggcatcaccttttcgtccactaaagatatgagccaaagccgaaagaaatttcgaacatcctacaaca gaaacagaataagttgcatgccagagaaactttctcagagcagcagtaagtcttctctctcaaacgtcaacgagagtctc cattcaagtagcactgaaggcttcgattcattttctgatccttcctccagcctgccctcctgcagaaatgtcatttcact gtcaacatctctggatggtttcaaaagagataacagcactgcatctgaaagtattagaagtaattcttcggtgacctcgt tggaggcaattccacaagatcctaacaatgaaggtgatgggagatcgagttcaaacggttctttaacgccggtcaattta aacgcttctagcaatcaccaatatcgccgacatggaagttcatctatctcttcagactccgaatgcaacgacatccagaa cttccctgacaataacagcgtcagtgacaacaaaaatgactttcctataacaattgaagggtctcagcaggaaacgaggg gcttagaaaatacaagatccgacatgtatcttaatgttcccgagagaggcacaggatttgctccttttcccgaaaacaaa cggattgaaactacttcaagatccatggatcaaagcattcagtccggtccacctcaacagaagagaaatgcatataacga agatgattttttctggtttcaaactacatcgagagacatatcatggtatggtcagaacaccttacagccggggaatatgc aactttcaacaacatatctacatacaaatactccattttatgagaatcctccgaataacaaaaatatgatcctaaacagc cacggcccagtggagtacaatgcattaggtattcagaactttccacaggctcaatttgatgatgacaaaatgaaaaggtt ctttgaagatcagagaaacatgcagataggaatacaagaccaaagagaagatccacaaatgaccttgcaacatggaaatc aaggaaccgaacagaggagttggccaatcatatcacacacagcacacatggatgaccagtctagcgtttggtcaggcgtt atgaatgatagtgtagaaaacaacattgtttcagaaagtaagcaccaaaacatgctaaacttgcaacatgacctcatgag atatacatacattaatcaaccgaacagtaatttttctccacaattccacgatatgcaccaaacaccaagccaggaaaact tcagagcctcgagcatgctatcggcgagaaattgttttccgacaaacccaacacaaatgaatactaccgctggatttcaa gaggaaaataaaagtctagtgaaagctagcagcccaaaaatttcaggtgtaaaggaaccaaaatcacaagttgcattcat agctttggccataatgagtcaacctgactgccggatgacgctcttcgaaatctatcaatatatcgaaacgaaccatcaac aatatcttcggcggcaagactggagaaacggtgtacgccacacactttctcacaacgtatgttttataaagaaagagaag gcaggtcatcgtccacggaagggtcattactggtcgattcatcctgcttgcatcaaagcattcaaagagggaatcttttg tttgcgtcactccaaacacctcgtcatggcttataaaaatccttgtgcgccgacaggaatttctcaacaacagaaagagc taatg |
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Protein
| Protein ID | pfu_aug1.0_18641.1_40074.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18641.1_40074.t1 MTIAHFELRSGRSFIQSHSLRRSPLMKKNSYAKFIQEDMLEMKNENNGELKSSHENSNLKRKRDKNTQGDVIGGRENFCR ITGNSPGSSSSSDGGDLLKTMNEPLFTDFFIKKRKLESSDGQSTPSSSPSQDSSEDNSLLENSPEDRRQNADTVNSRDME ESLDMNFQQHKKYRFQNSLDYLSARKFSRGMGITFSSTKDMSQSRKKFRTSYNRNRISCMPEKLSQSSSKSSLSNVNESL HSSSTEGFDSFSDPSSSLPSCRNVISLSTSLDGFKRDNSTASESIRSNSSVTSLEAIPQDPNNEGDGRSSSNGSLTPVNL NASSNHQYRRHGSSSISSDSECNDIQNFPDNNSVSDNKNDFPITIEGSQQETRGLENTRSDMYLNVPERGTGFAPFPENK RIETTSRSMDQSIQSGPPQQKRNAYNEDDFFWFQTTSRDISWYGQNTLQPGNMQLSTTYLHTNTPFYENPPNNKNMILNS HGPVEYNALGIQNFPQAQFDDDKMKRFFEDQRNMQIGIQDQREDPQMTLQHGNQGTEQRSWPIISHTAHMDDQSSVWSGV MNDSVENNIVSESKHQNMLNLQHDLMRYTYINQPNSNFSPQFHDMHQTPSQENFRASSMLSARNCFPTNPTQMNTTAGFQ EENKSLVKASSPKISGVKEPKSQVAFIALAIMSQPDCRMTLFEIYQYIETNHQQYLRRQDWRNGVRHTLSHNVCFIKKEK AGHRPRKGHYWSIHPACIKAFKEGIFCLRHSKHLVMAYKNPCAPTGISQQQKELM |
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