Gene
Gene Model ID | pfu_aug1.0_18674.1_32943 |
---|---|
Locus | scaffold18674.1 : 13285 ... 21814 : - |
To GenomeBrowser | scaffold18674.1:13285..21814 |
Genes list of scaffold | scaffold18674.1 |
Synonym | pfu_aug2.0_179.1_30369 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_18674.1_32943.t1 | 1 | 1 | DUF3677 | 250 | 330 | 5.5e-26 | 90.8 | 2.1e-29 | 1.5e-25 | 89.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_18674.1_32943.t1 | gi|119607608|gb|EAW87202.1| | hCG1993380, isoform CRA_a, partial [Homo sapiens] | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_18674.1_32943.t1 |
---|---|
Definition | - |
>pfu_aug1.0_18674.1_32943.t1 gggaagtattggaagcagaagacacgtgtaatgatgagagaatggaaggcctactttgtggagcggtcaagcacttacat tacaataggtcaaaaccagaccaggccgtttacttaaccttgatgtacttggccaaaacacactcagctattttcaacag tgacgttgtcatacaggccatatctagcttgctaagaagagatttgtctctgaattttaagtccaagggcaattgtttag tttctgtgttagcctgtgaggtgctaatggaggcattcgacaaggaagataactggccagacgactttgtaaaggtattt gttgaggattcattaggagagagagtatgggttgataggtcagactgcaaagccttcacagataacattattacagcctt caataccaatctacctgtaaaacctacaacaagctcggaaactaatcctactaaagaaacctctggaactgcaagtccag ttgtcatgtttttacaagaagaagatgaaagcactactggtagtggagctagcgaagaaaaagttctagccatagaggaa attaaaaacatagccgtaactcctaggcaaaatgtgcgattcacggaatttgcacgtgaccaaccagaattatacaacca tgaacaccaaaagtatcagtttcagcaagagactatagaaagttatatcatggatataatcaaggatcagttcaataaac gacagccaatggattccatgtcacgtaattttattcgtttcctgacggctacaagcggatatggagaagtcagactatta gcggcacagaaactagaaatatggctccagaatccaaagctttctaggtcagctcaggaactgttgatggccatatgtat gaattgtaaccaacacgaccagaacgatttagaggtggtggccctactggtcaagatccgtatgaagaccaagccccttc ttaaccacttcctaagcagtctcaagaaaattgcttggaattgtgacttttgtcgaagaattcaatgtggccgcatgaaa cgtttatga |
Protein
Protein ID | pfu_aug1.0_18674.1_32943.t1 |
---|---|
Definition | - |
>pfu_aug1.0_18674.1_32943.t1 EVLEAEDTCNDERMEGLLCGAVKHLHYNRSKPDQAVYLTLMYLAKTHSAIFNSDVVIQAISSLLRRDLSLNFKSKGNCLV SVLACEVLMEAFDKEDNWPDDFVKVFVEDSLGERVWVDRSDCKAFTDNIITAFNTNLPVKPTTSSETNPTKETSGTASPV VMFLQEEDESTTGSGASEEKVLAIEEIKNIAVTPRQNVRFTEFARDQPELYNHEHQKYQFQQETIESYIMDIIKDQFNKR QPMDSMSRNFIRFLTATSGYGEVRLLAAQKLEIWLQNPKLSRSAQELLMAICMNCNQHDQNDLEVVALLVKIRMKTKPLL NHFLSSLKKIAWNCDFCRRIQCGRMKRL |