Gene
| Gene Model ID | pfu_aug1.0_1868.1_37157 |
|---|---|
| Locus | scaffold1868.1 : 15756 ... 43306 : + |
| To GenomeBrowser | scaffold1868.1:15756..43306 |
| Genes list of scaffold | scaffold1868.1 |
| Synonym | pfu_aug2.0_2151.1_05426 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1868.1_37157.t1 | 5 | 1 | hEGF | 107 | 112 | 3.5e-09 | 36.1 | 0.39 | 140.0 | 2.8 |
| pfu_aug1.0_1868.1_37157.t1 | 4 | 1 | EGF | 119 | 147 | 2.6e-13 | 49.6 | 1.1e-06 | 0.00039 | 20.3 |
| pfu_aug1.0_1868.1_37157.t1 | 5 | 2 | hEGF | 137 | 149 | 3.5e-09 | 36.1 | 0.0015 | 0.56 | 10.4 |
| pfu_aug1.0_1868.1_37157.t1 | 4 | 2 | EGF | 161 | 185 | 2.6e-13 | 49.6 | 1.8e-05 | 0.0066 | 16.4 |
| pfu_aug1.0_1868.1_37157.t1 | 5 | 3 | hEGF | 174 | 186 | 3.5e-09 | 36.1 | 5.4e-05 | 0.02 | 14.9 |
| pfu_aug1.0_1868.1_37157.t1 | 4 | 3 | EGF | 193 | 221 | 2.6e-13 | 49.6 | 1.4e-06 | 0.0005 | 19.9 |
| pfu_aug1.0_1868.1_37157.t1 | 5 | 4 | hEGF | 211 | 223 | 3.5e-09 | 36.1 | 5.5e-05 | 0.021 | 14.9 |
| pfu_aug1.0_1868.1_37157.t1 | 4 | 4 | EGF | 230 | 266 | 2.6e-13 | 49.6 | 4.2e-05 | 0.015 | 15.2 |
| pfu_aug1.0_1868.1_37157.t1 | 5 | 5 | hEGF | 257 | 268 | 3.5e-09 | 36.1 | 0.0038 | 1.4 | 9.1 |
| pfu_aug1.0_1868.1_37157.t1 | 2 | 1 | TMEM154 | 299 | 400 | 4.1e-08 | 33.0 | 2.5e-08 | 9.1e-06 | 25.4 |
| pfu_aug1.0_1868.1_37157.t1 | 2 | 1 | DUF4448 | 338 | 387 | 2.7e-07 | 30.2 | 3.6e-06 | 0.0013 | 18.2 |
| pfu_aug1.0_1868.1_37157.t1 | 2 | 2 | DUF4448 | 391 | 431 | 2.7e-07 | 30.2 | 4.9e-05 | 0.018 | 14.5 |
| pfu_aug1.0_1868.1_37157.t1 | 2 | 2 | TMEM154 | 405 | 434 | 4.1e-08 | 33.0 | 0.00097 | 0.36 | 10.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1868.1_37157.t1 | gi|297460170|ref|XP_001252843.3| | 3.0e-37 |
Transcript
| Transcript ID | pfu_aug1.0_1868.1_37157.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1868.1_37157.t1 atgaacatcgacggcgggaaaaatataggacagtgcaaaccaactgtttcccaagatgacactggaggatattgtgacca ttgcatgtatacgggactggtagattatcaaaataggaaaagtatcgacttctctagtcccagatattcatctaatgata catcgcttgtgtttgaagagaattcaggacaaactgattctgtctatgtatatgtctacattactcgaaaacagtggtat aaagaaaagctacaggattttttggatgaaaattgtgatgtctacaacaattcaacaaggatttggggaactcatagata cacaggaaaaaattgcttagtaaatatagacgaatgtacatcgaatccttgtgtccatggcatgtgcaaagacatgatag actattttatgtgtgaatgtgagttaggtttctctggaattttatgcgatgaagatatcaatgactgtattaacacaact tgccatcatggagagtgtattgatggactgaacatctacacttgtaattgtgaaaatggttttactggagcacactgcaa cgcctctgttgacgattgtaaaacgaatatgtgtgtgaatggaatgtgtgtagatggtcacagaaattacacttgcctat gtaaccctggttatacaggaagtgtttgtgatacaaggatagatttttgtttcaataattcatgtttaaatggcaaatgc atcgatgcattttacgaaactattaagacaagagaatcaagctatttatgtgtctgtgatcttgattttactggtcaatt ctgtgatattgaaatcaacaatttgacagaaactgtgaatatcaaatccacagtaacaaaatcatatttatctgaagtaa aaagtccagagacacagaaaggttccacatttacagagtttccattaacgacgcaagtttcagaaacagtcagcagtaca ttagaaacgagtggatcaggcagagtaacatcaacatatataacgagagagaaaaattcatcagatttcgagcagtcaaa ggatttagaaaataagaaatcggtgaaatacatgtaccctctgattgcggtggctgttgttctggtattggttcttggaa ttgttgcagttgttgtatgttataaacggcggaaaggaagacaacccagcatggaatcggaaaataagaaatcggtgaaa tacatgtaccctctgattgcggtggctgttgttttggtattggttcttggaattgttgcagtggttgtatgttataaacg gcggaaaggaagacaacccagcatggaatcgaacactattgcagagggtaatgatttgaacgatgcattagaccgtagga catcccttgatgactttaatagagctatagcggaacgacattatggttacatgtcgggcgacagcggtgccaacttctcc agagtttacaatagctttattactcaggacattgataatgtgcttcgtttcttattcgcattaagcagttccattgcgtt tgcatttcgttatgatcatatttttcaacaccgttttcgttcaaaattcgtcaagtttgacaaattttactcatttgcaa agcttcgttctatggattcgtctatatgtgaaagggccttaaagtacatgtacatgtatttagctttccagtcttcagaa cttatcatatctgcaatcggtcggaaaccatctatgaagagaatccggttcatattgcagacggcacagcgccggcgcag caactacactattaatgatagtaactatatcctctccatattctctacccagttatttcccttttttatatctgatggat ag |
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Protein
| Protein ID | pfu_aug1.0_1868.1_37157.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1868.1_37157.t1 MNIDGGKNIGQCKPTVSQDDTGGYCDHCMYTGLVDYQNRKSIDFSSPRYSSNDTSLVFEENSGQTDSVYVYVYITRKQWY KEKLQDFLDENCDVYNNSTRIWGTHRYTGKNCLVNIDECTSNPCVHGMCKDMIDYFMCECELGFSGILCDEDINDCINTT CHHGECIDGLNIYTCNCENGFTGAHCNASVDDCKTNMCVNGMCVDGHRNYTCLCNPGYTGSVCDTRIDFCFNNSCLNGKC IDAFYETIKTRESSYLCVCDLDFTGQFCDIEINNLTETVNIKSTVTKSYLSEVKSPETQKGSTFTEFPLTTQVSETVSST LETSGSGRVTSTYITREKNSSDFEQSKDLENKKSVKYMYPLIAVAVVLVLVLGIVAVVVCYKRRKGRQPSMESENKKSVK YMYPLIAVAVVLVLVLGIVAVVVCYKRRKGRQPSMESNTIAEGNDLNDALDRRTSLDDFNRAIAERHYGYMSGDSGANFS RVYNSFITQDIDNVLRFLFALSSSIAFAFRYDHIFQHRFRSKFVKFDKFYSFAKLRSMDSSICERALKYMYMYLAFQSSE LIISAIGRKPSMKRIRFILQTAQRRRSNYTINDSNYILSIFSTQLFPFFISDG |
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