Gene
| Gene Model ID | pfu_aug1.0_1869.1_37163 |
|---|---|
| Locus | scaffold1869.1 : 37209 ... 44445 : - |
| To GenomeBrowser | scaffold1869.1:37209..44445 |
| Genes list of scaffold | scaffold1869.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1869.1_37163.t1 | 6 | 1 | zf-Di19 | 85 | 97 | 6.2e-07 | 29.4 | 0.06 | 130.0 | 2.8 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 1 | zf-C2H2 | 86 | 107 | 4.3e-20 | 70.7 | 0.00044 | 0.93 | 9.9 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 1 | zf-H2C2_2 | 86 | 96 | 4.0e-15 | 55.2 | 0.0089 | 19.0 | 5.7 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 1 | zf-C2H2_4 | 87 | 107 | 9.8e-23 | 78.7 | 2.6e-05 | 0.056 | 13.7 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 2 | zf-C2H2_4 | 338 | 359 | 9.8e-23 | 78.7 | 1.3e-05 | 0.028 | 14.7 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 2 | zf-C2H2 | 338 | 359 | 4.3e-20 | 70.7 | 4.6e-06 | 0.0097 | 16.2 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 2 | zf-H2C2_2 | 338 | 346 | 4.0e-15 | 55.2 | 0.24 | 520.0 | 1.2 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 3 | zf-H2C2_2 | 355 | 375 | 4.0e-15 | 55.2 | 1.0e-06 | 0.0022 | 18.1 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 3 | zf-C2H2_4 | 365 | 387 | 9.8e-23 | 78.7 | 0.00042 | 0.9 | 10.0 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 3 | zf-C2H2 | 365 | 387 | 4.3e-20 | 70.7 | 0.0042 | 8.9 | 6.8 |
| pfu_aug1.0_1869.1_37163.t1 | 6 | 2 | zf-Di19 | 365 | 416 | 6.2e-07 | 29.4 | 1.1e-05 | 0.023 | 14.8 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 4 | zf-H2C2_2 | 383 | 403 | 4.0e-15 | 55.2 | 0.00054 | 1.1 | 9.6 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 4 | zf-C2H2_4 | 393 | 416 | 9.8e-23 | 78.7 | 2.9e-07 | 0.00062 | 19.9 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 4 | zf-C2H2 | 393 | 416 | 4.3e-20 | 70.7 | 1.4e-06 | 0.0029 | 17.8 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 5 | zf-H2C2_2 | 407 | 430 | 4.0e-15 | 55.2 | 0.0098 | 21.0 | 5.6 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 5 | zf-C2H2_4 | 421 | 443 | 9.8e-23 | 78.7 | 6.5e-05 | 0.14 | 12.5 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 5 | zf-C2H2 | 422 | 443 | 4.3e-20 | 70.7 | 6.1e-05 | 0.13 | 12.6 |
| pfu_aug1.0_1869.1_37163.t1 | 6 | 3 | zf-Di19 | 423 | 443 | 6.2e-07 | 29.4 | 0.0096 | 20.0 | 5.3 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 6 | zf-C2H2 | 526 | 546 | 4.3e-20 | 70.7 | 0.072 | 150.0 | 3.0 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 6 | zf-C2H2_4 | 527 | 546 | 9.8e-23 | 78.7 | 0.0065 | 14.0 | 6.3 |
| pfu_aug1.0_1869.1_37163.t1 | 6 | 4 | zf-Di19 | 527 | 574 | 6.2e-07 | 29.4 | 1.4e-06 | 0.003 | 17.6 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 6 | zf-H2C2_2 | 540 | 563 | 4.0e-15 | 55.2 | 1.2e-09 | 2.6e-06 | 27.4 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 7 | zf-C2H2_4 | 552 | 574 | 9.8e-23 | 78.7 | 9.8e-07 | 0.0021 | 18.2 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 7 | zf-C2H2 | 552 | 574 | 4.3e-20 | 70.7 | 1.1e-07 | 0.00023 | 21.3 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 7 | zf-H2C2_2 | 566 | 591 | 4.0e-15 | 55.2 | 6.1e-08 | 0.00013 | 22.0 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 8 | zf-C2H2_4 | 580 | 602 | 9.8e-23 | 78.7 | 1.5e-07 | 0.00032 | 20.8 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 8 | zf-C2H2 | 580 | 602 | 4.3e-20 | 70.7 | 4.6e-08 | 9.8e-05 | 22.4 |
| pfu_aug1.0_1869.1_37163.t1 | 6 | 5 | zf-Di19 | 580 | 599 | 6.2e-07 | 29.4 | 0.16 | 340.0 | 1.4 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 8 | zf-H2C2_2 | 855 | 862 | 4.0e-15 | 55.2 | 0.2 | 430.0 | 1.4 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 9 | zf-C2H2 | 856 | 878 | 4.3e-20 | 70.7 | 0.024 | 51.0 | 4.4 |
| pfu_aug1.0_1869.1_37163.t1 | 6 | 6 | zf-Di19 | 856 | 905 | 6.2e-07 | 29.4 | 0.00091 | 1.9 | 8.6 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 9 | zf-H2C2_2 | 871 | 893 | 4.0e-15 | 55.2 | 0.0013 | 2.8 | 8.3 |
| pfu_aug1.0_1869.1_37163.t1 | 9 | 9 | zf-C2H2_4 | 886 | 908 | 9.8e-23 | 78.7 | 0.011 | 23.0 | 5.6 |
| pfu_aug1.0_1869.1_37163.t1 | 10 | 10 | zf-C2H2 | 886 | 908 | 4.3e-20 | 70.7 | 0.0012 | 2.6 | 8.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1869.1_37163.t1 | gi|326673963|ref|XP_003200039.1| | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_1869.1_37163.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1869.1_37163.t1 atggatttatcaagcaaatcgcaccaaagtgcgtccgctcagggaatctacacgggtactaacttggctctgaactttag tcagtcggaatcagggaggctgaaggcaagtccttcatttggagagagtccgccatataaaggcgtgacgtcagacacat ttccttacgggttaagcggcgtttccatgcctacatacgggtatcctagcgacctgtaccaatttacgcccaatggctat ccgcgaaaatcacgtacctgctcgtattgcagcaaagttttcacaagatcgactacacggcggtaccacgagaaacggtg tcctttgttacgggcggcagtctgcagtagcatggcacccgaagattcgggtaaaaagggcgtggccaatcaacgtggcc agagtatacctacctcatcaattataccacagagtgtccaagaaacacggtcactcgaagccaaattacaagcaatgtca gggagccattctaaaaatcacctcaagtctacctcacctctacactcctctccctccaattctgacgactggagagaggg gaacggctacaattatcatactagtgttatcgttaaaaaagaagctcaggacaaatctcatgctcactcttctactcata atcagcaaaatgaccccacttcacgtctagcacgcgaatctcagtcctcacctctcaatcacaaaatggatctgtccacc tatgcctcgtctcctttttcgatgcgaacaaagttggatttctccaaaatacaaggggaggagagtagtcctggtagcca cgaggacattccgaaggatgatggctactacctcaaggagggttcttcagcatacatgaataattggaagggcaaggccg acaacatggaaactacctcaaatatttcgtctcaggaagttgttaacggcacatccgttgctaaggatgaagcacatccc gaagaagtacgggaagactccaagaatgacgacgggggcagcaacgagacaaagtgtgaagtctgtggaaaaatatttcc atcgtcatggcaacttcatgtccacgagcagatacacacaaagtttaagccatacgcatgtcgtttctgtggtgaccgct tctcaaaggcagcattgaggatcactcatgaaaaagttcatctcggggacgcaaattacgcatgcgctgtttgtggggca aattttacgcagaaaggcagcttacgtcagcacgttcggcgcagacatcacgttggaccttggatttgccgtcattgcgg caccacttcttcatcacaaaaagatctttatgaccatctacaaacacacgatctttccaaaaacgaagatgaatcgcttc aatgcctgatagaggcgcctggagccgacgatgccgagatgatggacgaagccgacggcgaagtggacgacgacggcgat caggaaaacgaggatgatattatgtctgattctaatgacaacgaaaattctccaggccaggagtcacctgtcgacaatct accgagcatggaagaacccccgcttccgcctgccgacgagaacgagccacgcgaaagctgtacgctgtgtgggcgagagt accctgtgagtcacatggcgtatcacatgaaagctcatgagaaccagaagccgtacagttgccctatctgcggcaagagg tttggctataagaacaacatgaagtctcatctgaaactacacgctgggatcaagccgtatcagtgtagtatatgtggagc gaagttcacgcgcgggtcaacactaaggcgacatgcgcgtcgacacggaatttcggcagaaagcgtttgggatctttttg tcaaaaatggaaatattgctcaacagtcaggtattggtgctggaatcagcggctccggggagtcacctagctcagggtca caccgcaccccatcgcgcgaaaatcgttctacaccggaagacttgcgctctaagaaagagaatacttccggtatcaccga ctctccatacagcagcctgtttaatacaccaccatccatgtccaacgctacttttaatttcttcatgaattatcacaatc accaggcagcagtagccgcagcgaccttcccctccatgtttaacacatctcttacatctacctccgatatcccgcctaga ttggccggtttcctcccatctagtcaatcaccacagaaagacgcactcaatctctcagtaccaaagatatccaagagcgt tgaacccgaagagtctggttgtaatagcgtccttgaccaattctcacctacctcagtaaatgctgaaaggtcaaggccac ttgtagaacccggatcttcaaggcctttggtaacggcgattcccagcataactgctaactgtacggatgtaggcgtacaa atgaaaaactgctgcagcactgggccggaatcaatgacaacaccgggaagccctagtgacgtcagtgtacactccgacac tggctccacctaccagcaaagtaccagttcagggttagataactccagtgagagtatctcaactcttctagctatgggac ggctatacaaatgcgatcattgtgaatgttatttttcagagtacgcgatgtacagaatacactcgaagcttcacgtgcga ggaaagagcgaccccttcgtgtgtcctgtttgtaatgagaactgccatgacaagatgtactttgctctgcatttagcaga acatttgcgttaa |
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Protein
| Protein ID | pfu_aug1.0_1869.1_37163.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1869.1_37163.t1 MDLSSKSHQSASAQGIYTGTNLALNFSQSESGRLKASPSFGESPPYKGVTSDTFPYGLSGVSMPTYGYPSDLYQFTPNGY PRKSRTCSYCSKVFTRSTTRRYHEKRCPLLRAAVCSSMAPEDSGKKGVANQRGQSIPTSSIIPQSVQETRSLEAKLQAMS GSHSKNHLKSTSPLHSSPSNSDDWREGNGYNYHTSVIVKKEAQDKSHAHSSTHNQQNDPTSRLARESQSSPLNHKMDLST YASSPFSMRTKLDFSKIQGEESSPGSHEDIPKDDGYYLKEGSSAYMNNWKGKADNMETTSNISSQEVVNGTSVAKDEAHP EEVREDSKNDDGGSNETKCEVCGKIFPSSWQLHVHEQIHTKFKPYACRFCGDRFSKAALRITHEKVHLGDANYACAVCGA NFTQKGSLRQHVRRRHHVGPWICRHCGTTSSSQKDLYDHLQTHDLSKNEDESLQCLIEAPGADDAEMMDEADGEVDDDGD QENEDDIMSDSNDNENSPGQESPVDNLPSMEEPPLPPADENEPRESCTLCGREYPVSHMAYHMKAHENQKPYSCPICGKR FGYKNNMKSHLKLHAGIKPYQCSICGAKFTRGSTLRRHARRHGISAESVWDLFVKNGNIAQQSGIGAGISGSGESPSSGS HRTPSRENRSTPEDLRSKKENTSGITDSPYSSLFNTPPSMSNATFNFFMNYHNHQAAVAAATFPSMFNTSLTSTSDIPPR LAGFLPSSQSPQKDALNLSVPKISKSVEPEESGCNSVLDQFSPTSVNAERSRPLVEPGSSRPLVTAIPSITANCTDVGVQ MKNCCSTGPESMTTPGSPSDVSVHSDTGSTYQQSTSSGLDNSSESISTLLAMGRLYKCDHCECYFSEYAMYRIHSKLHVR GKSDPFVCPVCNENCHDKMYFALHLAEHLR |
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