Gene
| Gene Model ID | pfu_aug1.0_18694.1_47243 |
|---|---|
| Locus | scaffold18694.1 : 8196 ... 23066 : + |
| To GenomeBrowser | scaffold18694.1:8196..23066 |
| Genes list of scaffold | scaffold18694.1 |
| Synonym | pfu_aug2.0_841.1_04622 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18694.1_47243.t1 | 2 | 1 | Pkinase | 32 | 47 | 1.6e-40 | 138.8 | 0.0092 | 23.0 | 4.0 |
| pfu_aug1.0_18694.1_47243.t1 | 2 | 1 | Pkinase_Tyr | 33 | 47 | 1.2e-21 | 76.9 | 0.0096 | 24.0 | 3.9 |
| pfu_aug1.0_18694.1_47243.t1 | 2 | 2 | Pkinase | 47 | 177 | 1.6e-40 | 138.8 | 1.80067e-42 | 4.4e-39 | 134.1 |
| pfu_aug1.0_18694.1_47243.t1 | 2 | 2 | Pkinase_Tyr | 52 | 172 | 1.2e-21 | 76.9 | 1.9e-23 | 4.6e-20 | 71.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18694.1_47243.t1 | gi|339254652|ref|XP_003372549.1| | hypothetical protein Tsp_10306 [Trichinella spiralis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-Dshape | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_18694.1_47243.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18694.1_47243.t1 atgctggtagatgaacagggggataatgacaatggaagagagatcaatgtcatcagtatcacaaaagatggagagaaagt cgaacctaaggactttgaattattaaaggttctaggacaagggtcatttggaaaggtgatgttcacggaagaggatgtca agttttacctagcagagcttgcgttagctctagatcatcttcattcactaggcatcgtgtacagagatctgaaaccagaa aatatattattagaccatgaggggcatataaagctcacagactttggtcttagtaaggaatcaatctttgaggagaagaa gacatattcgttctgcggaactgtcgagtacatggccccagaggtcgtcaaccgtaaaggtcacagtactgcagctgatt ggtggtcgtttggagttctcatggagttacaatttcttttccagtttgaaatgttgacaggatcactgccatttcaagga gcaaacaggaaggagacaatgacacaaatattaaaacggcttatgtcaactcttttatcatacaatgtccttgctacatg tatgtttgaaggttcaggagctaacggtattgaggacataaagaagcagccgttcttcgctacgatagacttcgataagc tttataaacgacagactaacccaccgtttaaacccgctgttgtccaaactgacgatgcattttactttgatgaagaattt accaggagaacaccaagagtaaatgtacatgtacattgtatgtacatagttaaagctctggatataggtacatttttagc tcacctcgacgaagttgagatgagcttatgctataaccccggcgtccgcatccgcgtccccgtccgcgtccgcgtccgcg tctgcgtccggttaaagtttttggggtaa |
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Protein
| Protein ID | pfu_aug1.0_18694.1_47243.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18694.1_47243.t1 MLVDEQGDNDNGREINVISITKDGEKVEPKDFELLKVLGQGSFGKVMFTEEDVKFYLAELALALDHLHSLGIVYRDLKPE NILLDHEGHIKLTDFGLSKESIFEEKKTYSFCGTVEYMAPEVVNRKGHSTAADWWSFGVLMELQFLFQFEMLTGSLPFQG ANRKETMTQILKRLMSTLLSYNVLATCMFEGSGANGIEDIKKQPFFATIDFDKLYKRQTNPPFKPAVVQTDDAFYFDEEF TRRTPRVNVHVHCMYIVKALDIGTFLAHLDEVEMSLCYNPGVRIRVPVRVRVRVCVRLKFLG |
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