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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_187.1_22042
Locus scaffold187.1 : 57141 ... 70155 : -
To GenomeBrowser scaffold187.1:57141..70155
Genes list of scaffold scaffold187.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_187.1_22042.t1 3 1 p450 24 68 1.79997e-41 142.1 7.7e-05 1.1 7.6
pfu_aug1.0_187.1_22042.t1 3 2 p450 87 136 1.79997e-41 142.1 2.4e-16 3.5e-12 45.5
pfu_aug1.0_187.1_22042.t1 3 3 p450 136 220 1.79997e-41 142.1 1.7e-29 2.5e-25 88.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_187.1_22042.t1 gi|195584707|ref|XP_002082146.1| GD11408 [Drosophila simulans] 3.0e-21

Transcript
Transcript IDpfu_aug1.0_187.1_22042.t1
Definition-
>pfu_aug1.0_187.1_22042.t1
atgggatcgtcctggatgtgtcacgtgttcgatccacatgacgtcgaagctatttatagatcagacggcaagaattacga
agcatggtgggaacagcgccgtgctattcaatctgttgttcagcgcccctccgtcataaaacagtatgttcccctactga
gtaatattgcagacgagtttgtggaaaaattcaaaggagaaactgtgataacagatgtcttttaccaaattatgaagttc
actattgaagcaggcgcgacgctttttgttttaattcatctggcaaaatatcaagacaagcaagaaaaactctacaacga
ggtcaaggacgttgtcaaaggaacaatcacagctgatgacctccagatgatgccttatctaaaagcttgtgtgaaagagt
ctttccgagatgaaaaatattttccaaatccaaaccagtttgtaccagagaggtggttacgagaagactcggaacgaaaa
gtcgatccttttgtgtttgtgccgtttggacatggtcctagaaactgtgttggacagcgatttgcagaaatagagattca
tgttcttatcgcaaagttaataaaagcttacaaagtgcagctccaagaatcctcggcggacatcgaggtcaaatatacga
cgtttgcacgtccatcagtcccggacgcttatacgcaaaagaaaaattactttgatgtataa

Protein
Protein IDpfu_aug1.0_187.1_22042.t1
Definition-
>pfu_aug1.0_187.1_22042.t1
MGSSWMCHVFDPHDVEAIYRSDGKNYEAWWEQRRAIQSVVQRPSVIKQYVPLLSNIADEFVEKFKGETVITDVFYQIMKF
TIEAGATLFVLIHLAKYQDKQEKLYNEVKDVVKGTITADDLQMMPYLKACVKESFRDEKYFPNPNQFVPERWLREDSERK
VDPFVFVPFGHGPRNCVGQRFAEIEIHVLIAKLIKAYKVQLQESSADIEVKYTTFARPSVPDAYTQKKNYFDV

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