Gene
| Gene Model ID | pfu_aug1.0_1873.1_29895 |
|---|---|
| Locus | scaffold1873.1 : 23786 ... 52217 : + |
| To GenomeBrowser | scaffold1873.1:23786..52217 |
| Genes list of scaffold | scaffold1873.1 |
| Synonym | pfu_aug2.0_621.1_04405 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1873.1_29895.t1 | 2 | 1 | DUF2042 | 2 | 198 | 0.0 | 243.4 | 0.0 | 0.0 | 240.1 |
| pfu_aug1.0_1873.1_29895.t1 | 2 | 2 | DUF2042 | 202 | 239 | 0.0 | 243.4 | 0.022 | 170.0 | 1.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1873.1_29895.t1 | gi|291227958|ref|XP_002733949.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1873.1_29895.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1873.1_29895.t1 atgactgatacaaagcgttcgttgagtgaaagaaatgtagtggagctggttgccaagcttatagagttaaagctgattga tgtgatatatactctggatggaaaggaatatctgacgcctcaggaactaaccaaagagatccgtgatgaactgctggtac atggagggcgcatcaacttggttgatttacaacaaatccttaatgtggacttcagccatattgaaaccaaagtcagtgag atggtcaagagtgacaaaagcctaatgttagtgctgggacaactagttgacaagagctaccttgatagcctagcagagga ggtgaatgacaagctacaggagaaaggtcatgtgacaataggagaaataacaaagcagtatgacctgcctgctgatttca tctcagagcatatacatgccagagtaggtaggattgtgaggggacaagtggacagctacgataaaaacgtcatatttact gactcatttctcaaacgcatgaaggcacaaataaggggagctttcagcgccatcacaaggcccacaacagttatgaatgt catgaacagatacagtttccaggaaaggctgtttttctttaatagtaaacgtcgtcattttcgtcaaggggaattttccc gaaatgaccattgcaaccttaaacagtatgatagtatggtgagacttggtatcactgatcctaaggctttcataaagaag agatttaagacggagcccctgacctacttaggaacatgctgtgctggagttggaatcaaagaccagatagaggccagtgt ggaggaagcactggcagaaaactcatgggctgatatcatgcccctcctaccttcagtgtttagtatggaggatggcagtc agttgctgacagaatgcctcaggaagcatcaatcagctgtccaatgttgtcataccatagttactagtcacaggttcctt gagaaatgtcgacaaccatttaaggacaaggttgccaaaaaggcagaggaggatgcacgaagtaatccctcgttgttcac agcagacattgagaaaaagggaggtaaatctgtttcgtttgaagatgccggaccctcaaaagaagataaaagggatcaac gacgtaaaaaacaagctggtgccacaaaaagtggaggtggtacccaaggtcgagaggtgaaaaccaaggcaacaaagaaa aaatataacaaaggtcgtggtgaccatggcaacgagtcagatgaagaggaccatgggaagaagttggaggaagcggtaga gtttatgccgatagatggaatagaggcggagctgagaaaacaaacagacttactggattgtcctgaagaatttataacgg agatagccacacagctttacaggcctttatgccgggaatatcaggagatgggaaagtctatatttctgactaatgttggt gtagataccggtacagggagaaagaaaactcacggagaactacaggaaaaaatagcaggattgtggaccaactgtaaact ctttgaaaaaggattaaagttgttttctgaggacacagaggcccagcttgtcaagcatttgttaaagtcagtgtgcagtg atattgttaatgttgtggtgtgtgctatcggctcagagaacatgatatcagtaccggaggacagcaatctaactacagag aatagagccaaaattatagccaaactacctgaaaatgtacagtctgtgttaacaaagcttcacacatctctaaatggaaa gtgtctggctggattactagcaaataagcaattgggaatcaaaatttga |
|
Protein
| Protein ID | pfu_aug1.0_1873.1_29895.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1873.1_29895.t1 MTDTKRSLSERNVVELVAKLIELKLIDVIYTLDGKEYLTPQELTKEIRDELLVHGGRINLVDLQQILNVDFSHIETKVSE MVKSDKSLMLVLGQLVDKSYLDSLAEEVNDKLQEKGHVTIGEITKQYDLPADFISEHIHARVGRIVRGQVDSYDKNVIFT DSFLKRMKAQIRGAFSAITRPTTVMNVMNRYSFQERLFFFNSKRRHFRQGEFSRNDHCNLKQYDSMVRLGITDPKAFIKK RFKTEPLTYLGTCCAGVGIKDQIEASVEEALAENSWADIMPLLPSVFSMEDGSQLLTECLRKHQSAVQCCHTIVTSHRFL EKCRQPFKDKVAKKAEEDARSNPSLFTADIEKKGGKSVSFEDAGPSKEDKRDQRRKKQAGATKSGGGTQGREVKTKATKK KYNKGRGDHGNESDEEDHGKKLEEAVEFMPIDGIEAELRKQTDLLDCPEEFITEIATQLYRPLCREYQEMGKSIFLTNVG VDTGTGRKKTHGELQEKIAGLWTNCKLFEKGLKLFSEDTEAQLVKHLLKSVCSDIVNVVVCAIGSENMISVPEDSNLTTE NRAKIIAKLPENVQSVLTKLHTSLNGKCLAGLLANKQLGIKI |
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