Gene
| Gene Model ID | pfu_aug1.0_188.1_14867 |
|---|---|
| Locus | scaffold188.1 : 13996 ... 23731 : + |
| To GenomeBrowser | scaffold188.1:13996..23731 |
| Genes list of scaffold | scaffold188.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_188.1_14867.t1 | 2 | 1 | RhoGEF | 2 | 160 | 1.1e-33 | 116.6 | 2.2e-37 | 1.1e-33 | 116.6 |
| pfu_aug1.0_188.1_14867.t1 | 2 | 2 | RhoGEF | 280 | 290 | 1.1e-33 | 116.6 | 0.73 | 3600.0 | -2.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_188.1_14867.t1 | gi|270004431|gb|EFA00879.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_188.1_14867.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_188.1_14867.t1 atgaagaataacggtctactgagttccgaacagctggaagccattttcctgaacttggatgaacttctgcacgtgaacac ccagttcacagatcgcctagaagccgctgttgatcttgcagtggaacgcggtgatgagaacttgacttcagttgtattgg gagatctgttcttaaagtcaacgaaacttattctgacattcgagcactactgcgtaaatcagagtcaggcaaccatactt ttagaacagctggagagagaaaaagagttgctgcgaatcttcttgaaggtctgtcaagacgaacacgcaattttacggag gatgcaccttaagtctttcttgatggttcccgtccagagaataatgaaatatcctttgttattggagagactctttaagg ctacacccaccgaacaccaagaccgagaagctctcctcaacgctaagaataaaatagaatcaatattggaacatattaat tcgagaactaaaagtgcagcacaagtgaaattgtccaaacggaagtcgaacgaccggaaatcgattacagtaacggaaaa gatagaagtcacaagaatagcaatggatgtcctaggatggcacaaacaggaggtctgtgacattttgactggtcaagttt tggtgtctcagactcaaagtgaccagagttgggctgtgaagagactcagaaatgtcaagtattctcaagtccatgcagtt ctattaactcttggacagggtgaactacaaagaaacgacgaggcagacctactcttccctcaaaaatctgaagttatcca agcagctgttgtgttaataaaagagaaaaatggaaagttccaaaagctcaggactatggttacagaacatcaggcagcaa acactgaatttgggaacttggagaaagagacggaatgccttaccaaacatcatgataaaacatttaatcacctgaagtaa |
|
Protein
| Protein ID | pfu_aug1.0_188.1_14867.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_188.1_14867.t1 MKNNGLLSSEQLEAIFLNLDELLHVNTQFTDRLEAAVDLAVERGDENLTSVVLGDLFLKSTKLILTFEHYCVNQSQATIL LEQLEREKELLRIFLKVCQDEHAILRRMHLKSFLMVPVQRIMKYPLLLERLFKATPTEHQDREALLNAKNKIESILEHIN SRTKSAAQVKLSKRKSNDRKSITVTEKIEVTRIAMDVLGWHKQEVCDILTGQVLVSQTQSDQSWAVKRLRNVKYSQVHAV LLTLGQGELQRNDEADLLFPQKSEVIQAAVVLIKEKNGKFQKLRTMVTEHQAANTEFGNLEKETECLTKHHDKTFNHLK |
|