Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_188.1_14883
Locus scaffold188.1 : 238586 ... 241066 : +
To GenomeBrowser scaffold188.1:238586..241066
Genes list of scaffold scaffold188.1
Synonym pfu_aug2.0_3293.1_12426

Manual annotation
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)

Libraries EST count
>Embryonic/Larval stages
mix 1
>Adult tissues

Transcript
Transcript IDpfu_aug1.0_188.1_14883.t1
Definition-
>pfu_aug1.0_188.1_14883.t1
atgttatggtacgaggggaaagaagtaggggatagtgccacgttcttttacttagcactcattcaattgctcattagaag
atctttcgaacagcaggatttcaatgatatcgatctctatgcactaacaaatcacagacatccaggtttacatcgtttga
atgtacttaatgtaccaaggttcaagacagtcagagagttctctagagttctgtcattattgggagaaatagcatataaa
gatcttttatcggatgaaacgcatcttgtatttgaaaaagcagaactttacgataaacttaccaaagccgaattgaactt
tgctttgaaggtaggacttttgagcaaaagcgaggcaccgggttgttttgacgaagaaaatgtgagtttgaatttttttc
acaaatccattcaagaatttcttgcgtcattttatgtttcaacaacatgtgatttgaaattattgtgtacaaaactttca
gacgttgaatccattcttgatttgtcgaatatttttgtttttacatcaggtttaagttcgtctctggcgagcgaattgtc
ggaacatatcgtaagaattgccaataatgacagaaaaattcgttttgctcgagaaacattcaacggaaagaacgagcggg
catcaaatttgcaatcactttttcttctccaattccgttgttatcaagaaatgaaatatggtaatatatcatcgtgtgat
tctacctttcaaccaatcacgtttcatgttggagatatatatcttgtgtgtggaaatgacagagacattatcaaagaaac
tgtagagataatgacacaccattacagcagtgtcgtgtcgctttatttgtggcatgtaccaagtactggagagcattgca
ttagggatgagtttctgaacaaatttctcaagaatgcaagttctcttcagtatatatttgtacgaggagcttcagtaatt
taccacatcaacgatgcaatacgtctaaaatccttgcatttattttccgtaagactatcacaagaagtgttacgtggatt
gcataaatcaatttcgtcaaataaggaactgaaggcattaactttaaaatggatgaaatgtacaacgagtgacagtaagg
aaaacaactcatcctactctttgatggatattttaagctgtctacctcaatgccctcatctttacatgcttacagtcaat
tattcaacgttagattcagtttattctatgaggattttatttccacctatgctatcgcatcttacaaacttgcgtgaaat
gtattatggtggactaacgttttatgatattttccttgaccattgtcctgacgctgccattcttgatacaatatcaaggc
taccaaatttagagtgtatacgtctttatgaagtcaacgtaaagtactatgctatgcaacttaagatggcgtcaccatct
ttgcaatacctggagctagatcatgtttgtttaggagatacgtcattggaaataagttctaatctatcaaaattaaacta
tatttcgttgacagatgtcaatatgtcagctcagaactggaaaattttcatttcttctctgaagagattgagtcatgagt
ttgatatctatatagcaagagcaaacattgatgagcgaattcttggaatgctaagggactcttcacactttttggaagtc
aaaaaacatatttttgtgatttgcattttagacgatcaccgatga

Protein
Protein IDpfu_aug1.0_188.1_14883.t1
Definition-
>pfu_aug1.0_188.1_14883.t1
MLWYEGKEVGDSATFFYLALIQLLIRRSFEQQDFNDIDLYALTNHRHPGLHRLNVLNVPRFKTVREFSRVLSLLGEIAYK
DLLSDETHLVFEKAELYDKLTKAELNFALKVGLLSKSEAPGCFDEENVSLNFFHKSIQEFLASFYVSTTCDLKLLCTKLS
DVESILDLSNIFVFTSGLSSSLASELSEHIVRIANNDRKIRFARETFNGKNERASNLQSLFLLQFRCYQEMKYGNISSCD
STFQPITFHVGDIYLVCGNDRDIIKETVEIMTHHYSSVVSLYLWHVPSTGEHCIRDEFLNKFLKNASSLQYIFVRGASVI
YHINDAIRLKSLHLFSVRLSQEVLRGLHKSISSNKELKALTLKWMKCTTSDSKENNSSYSLMDILSCLPQCPHLYMLTVN
YSTLDSVYSMRILFPPMLSHLTNLREMYYGGLTFYDIFLDHCPDAAILDTISRLPNLECIRLYEVNVKYYAMQLKMASPS
LQYLELDHVCLGDTSLEISSNLSKLNYISLTDVNMSAQNWKIFISSLKRLSHEFDIYIARANIDERILGMLRDSSHFLEV
KKHIFVICILDDHR

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495