Gene
| Gene Model ID | pfu_aug1.0_18806.1_32951 |
|---|---|
| Locus | scaffold18806.1 : 19 ... 14424 : + |
| To GenomeBrowser | scaffold18806.1:19..14424 |
| Genes list of scaffold | scaffold18806.1 |
| Synonym | pfu_aug2.0_9.1_29952 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18806.1_32951.t1 | 2 | 1 | BACK | 40 | 57 | 2.8e-26 | 91.3 | 0.38 | 710.0 | 0.1 |
| pfu_aug1.0_18806.1_32951.t1 | 2 | 1 | BTB | 43 | 148 | 2.5e-25 | 88.5 | 1.4e-28 | 2.5e-25 | 88.5 |
| pfu_aug1.0_18806.1_32951.t1 | 2 | 2 | BACK | 155 | 254 | 2.8e-26 | 91.3 | 1.9e-29 | 3.5e-26 | 91.0 |
| pfu_aug1.0_18806.1_32951.t1 | 2 | 2 | BTB | 239 | 282 | 2.5e-25 | 88.5 | 0.39 | 720.0 | 0.1 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 1 | Kelch_6 | 372 | 406 | 2.9e-11 | 43.0 | 7.0e-06 | 0.013 | 15.6 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 1 | Kelch_3 | 372 | 414 | 1.2e-08 | 34.8 | 3.8e-06 | 0.007 | 16.5 |
| pfu_aug1.0_18806.1_32951.t1 | 3 | 1 | Kelch_1 | 373 | 404 | 8.8e-20 | 69.9 | 1.3e-11 | 2.5e-08 | 33.3 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 1 | Kelch_4 | 373 | 404 | 4.1e-12 | 45.6 | 2.3e-05 | 0.043 | 13.5 |
| pfu_aug1.0_18806.1_32951.t1 | 3 | 2 | Kelch_1 | 408 | 491 | 8.8e-20 | 69.9 | 1.7e-09 | 3.1e-06 | 26.6 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 2 | Kelch_4 | 409 | 429 | 4.1e-12 | 45.6 | 2.0e-05 | 0.037 | 13.7 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 2 | Kelch_6 | 409 | 447 | 2.9e-11 | 43.0 | 0.00033 | 0.62 | 10.3 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 2 | Kelch_3 | 417 | 431 | 1.2e-08 | 34.8 | 0.013 | 24.0 | 5.2 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 3 | Kelch_4 | 469 | 491 | 4.1e-12 | 45.6 | 0.00015 | 0.27 | 11.0 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 3 | Kelch_3 | 470 | 500 | 1.2e-08 | 34.8 | 0.0033 | 6.0 | 7.1 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 3 | Kelch_6 | 472 | 493 | 2.9e-11 | 43.0 | 0.00016 | 0.3 | 11.3 |
| pfu_aug1.0_18806.1_32951.t1 | 3 | 3 | Kelch_1 | 493 | 514 | 8.8e-20 | 69.9 | 0.002 | 3.8 | 7.1 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 4 | Kelch_6 | 495 | 540 | 2.9e-11 | 43.0 | 0.0045 | 8.4 | 6.7 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 4 | Kelch_4 | 502 | 515 | 4.1e-12 | 45.6 | 0.022 | 41.0 | 4.0 |
| pfu_aug1.0_18806.1_32951.t1 | 4 | 4 | Kelch_3 | 504 | 514 | 1.2e-08 | 34.8 | 0.22 | 410.0 | 1.3 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_18806.1_32951.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18806.1_32951.t1 atgagtggagacccagcatcaagccctgactccatgttagatggacagtcatctatctgtgacacgcccagctccccaga cgacaggtttgtcgatgaggacaggtcgatgaaacttttacaaggattctccaagctttataaggatcaagaatttgtgg atgtaacactttgtgtggaggatacagaatttccctgccataagaatgtgcttgccgtgtccagcccattcttcatggcg atgttctcatcaaatttggccgaaagtcagcaggataaaattccgttaaaggaacttgactcgcaaactatgagccttgt tttggattacatatacacaggacaagtcatgctgtctgaggacactgttcagcatcttctttcagcatccaacagatttc aactgatttcactacgcagcggttgtgcagagttcatgatgaaccacataacagtgtcaaattgtattggtgtctacttc tttgctattgctcatgaatgtaaggtgcttgccatgaaagccaaagaaataataaacaatcagttctctgtgctctgtaa gcagcaagagttcctatcactacctgcagacaaactggtagagataatcagcgatgatgaaatcaatgttggacttgagg agacggtgttcgaagcttgcatggactggttacaaatcgagcctactgacagactcaagcacttggtctccataatgaac tgtgtcaggtttgccaatataagctcatattacttctgtgataagatagacacaaatctagtcttgaagcagagtgagaa gttacgacaaactttagatactgtacggtactatcacatgctacgcaatcgacagcaggaaatggatttgaatctcatgc cacgtggcggaatgtcatacgagcgggcagtgatgattattgccaacccgtacacagaggaatctcttaagaagtataac agtatggaaatgttgctgcctaaaacaggagaggttataaatatatgtaaactaccacaaagcttatatactccagctac attttacacttttcgtaagaaacagaaattcctgtacaatgtacaatatatttacatcaccttttacagatatgcttttg ctattggtggccaagatgggacagagatactaagtacagtggaacgatatgactcaaatacgaatgcttggatgctcgtt gctccacttccgaagcctctacgatttatgacgtcaacaagtcataaaggcaagctgtatgtctttggaggagaatcaac cagtgatgtcagtagttcaggtttcagtgattatatttactccaataattggaatcaaacttcaccttaccaaggtggta actcagctataagtgaaaaatggaaaaaggaatttctacccgagcattgtgtcagtactgttgaaatctttgatcctacc aacgagaaatggagtccgggaccagagctgccgaatgctctatgtggtgcaggtatagtcaagtacagtaatacgatcct gatcgtgggaggagaggatgataagagttggatggctggactatgctggctaaaggatgataacggcaaacagtcatggg tcgaaggacaggagctaccgacagtgatgagcacatttggttgtgttgtggccaatattcaacatgaagtgtttaaacag gaatga |
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Protein
| Protein ID | pfu_aug1.0_18806.1_32951.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18806.1_32951.t1 MSGDPASSPDSMLDGQSSICDTPSSPDDRFVDEDRSMKLLQGFSKLYKDQEFVDVTLCVEDTEFPCHKNVLAVSSPFFMA MFSSNLAESQQDKIPLKELDSQTMSLVLDYIYTGQVMLSEDTVQHLLSASNRFQLISLRSGCAEFMMNHITVSNCIGVYF FAIAHECKVLAMKAKEIINNQFSVLCKQQEFLSLPADKLVEIISDDEINVGLEETVFEACMDWLQIEPTDRLKHLVSIMN CVRFANISSYYFCDKIDTNLVLKQSEKLRQTLDTVRYYHMLRNRQQEMDLNLMPRGGMSYERAVMIIANPYTEESLKKYN SMEMLLPKTGEVINICKLPQSLYTPATFYTFRKKQKFLYNVQYIYITFYRYAFAIGGQDGTEILSTVERYDSNTNAWMLV APLPKPLRFMTSTSHKGKLYVFGGESTSDVSSSGFSDYIYSNNWNQTSPYQGGNSAISEKWKKEFLPEHCVSTVEIFDPT NEKWSPGPELPNALCGAGIVKYSNTILIVGGEDDKSWMAGLCWLKDDNGKQSWVEGQELPTVMSTFGCVVANIQHEVFKQ E |
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