Gene
| Gene Model ID | pfu_aug1.0_18828.1_69227 |
|---|---|
| Locus | scaffold18828.1 : 9124 ... 21975 : - |
| To GenomeBrowser | scaffold18828.1:9124..21975 |
| Genes list of scaffold | scaffold18828.1 |
| Synonym | pfu_aug2.0_1.1_03332 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18828.1_69227.t1 | 1 | 1 | Cytochrom_B561 | 131 | 268 | 3.2e-08 | 33.5 | 4.3e-12 | 3.2e-08 | 33.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18828.1_69227.t1 | gi|321472635|gb|EFX83604.1| | hypothetical protein DAPPUDRAFT_301622 [Daphnia pulex] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-Dshape | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_18828.1_69227.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18828.1_69227.t1 atggcatcagatttcgtcactgagtgtgctatggaaggatccagtggcgtggccgtatacaaatcatacaatgttgataa tagtaagtttaatcaacggaaccctgatccaaagcttggaatcacaggtgactctggctctgtcactgataatattctaa gctgtcaattcacactacaaactgccggtgtgactgcaggaaacaacaaacttgagaaccttgagaacgattttgttatg tttttcggtaaaggtatgatgtcatcagatctggcctcaaagcggatgcattctacaattccccaggtatctccagatgg cgtaatggtagacttacaaggcacgcaaaatataggtggcaccactgccacatttgctctggttaaagcacatggctgtc tgatgattgcagcttgggtactgtttgccagtattggagtagtacttgccaggtactacaaacccatgtggccagagagg aaacttcttaaagaaaaagtctggtttcagtttcaccgtgggctgatggttttagcattagtttgtgttataacaggctt tgttctgatttttgtgcatgctgaaggctggacaaacattgagggtcctgatgtatccaatttccagaaagctcatcctt atttaggggtgatcgtaacggcactgaccttgatcaatcctataatggcgctgttccgaccacatcccggtgataaatac agatttgttttcaactgggcacattggatggtgggtacgggaggccatattcttggtgttctcacgatatttattggagt gacattacaaatatccagcacacctttctatgtggtgtatattttagcggcgtacgcaggatatcaatttttcatagagc tcttgcttgaaattcatgactgttgcttaagtggaagcaagtcccgaagttccgcatatgagatgaaagatgcaaacaaa ttagagcgggaagatcaacccacggatcctgacggcagtaaattcaagaaaattgttatcgcgttacatactgtcatcat agtggggttcgctactacgattattgttattgtggccattaattaa |
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Protein
| Protein ID | pfu_aug1.0_18828.1_69227.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18828.1_69227.t1 MASDFVTECAMEGSSGVAVYKSYNVDNSKFNQRNPDPKLGITGDSGSVTDNILSCQFTLQTAGVTAGNNKLENLENDFVM FFGKGMMSSDLASKRMHSTIPQVSPDGVMVDLQGTQNIGGTTATFALVKAHGCLMIAAWVLFASIGVVLARYYKPMWPER KLLKEKVWFQFHRGLMVLALVCVITGFVLIFVHAEGWTNIEGPDVSNFQKAHPYLGVIVTALTLINPIMALFRPHPGDKY RFVFNWAHWMVGTGGHILGVLTIFIGVTLQISSTPFYVVYILAAYAGYQFFIELLLEIHDCCLSGSKSRSSAYEMKDANK LEREDQPTDPDGSKFKKIVIALHTVIIVGFATTIIVIVAIN |
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