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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1891.1_15652
Locus scaffold1891.1 : 38720 ... 46752 : -
To GenomeBrowser scaffold1891.1:38720..46752
Genes list of scaffold scaffold1891.1
Synonym pfu_aug2.0_5.1_16673

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_1891.1_15652.t1 1 1 Ets 96 177 8.0e-38 128.4 2.89999e-41 1.4e-37 127.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1891.1_15652.t1 gi|291235822|ref|XP_002737846.1| PREDICTED: ETS domain-containing protein Elk-3-like [Saccoglossus kowalevskii] 0.0

Transcript
Transcript IDpfu_aug1.0_1891.1_15652.t1
Definition-
>pfu_aug1.0_1891.1_15652.t1
agacaaaagaacattgaaattaaggcaattcttagtctatgatgccggaccctggagccttctgcttgtacctatggcaa
atgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgaatttccatacaagtttataaatatttat
attttgctgtcagatgtccgacaacattcagtctccccagcgttatctgactcgtcatccaggctgtctgacgacaacaa
aagacttggtttaagttcaaacagaaacaaaataatggattccaacattacgttatggcagttcctgctggaattgttag
ttaaccagcaacatgctgacattatacaatggaccaatactgagggagaattcaaactcatcaacgcagaggaagtggca
cgattgtggggactgcgcaagaataaaacaaacatgaattacgacaagcttagtcgggctttacgttattattacgacaa
aaatatcatcaaaaaagtgatgggacaaaagtttgtctacaaatttgtttcttttccagaaatcgtaaaaacggagaata
aagtaacgttcaaagacaaaatggcgagtttagctcaaacttacggccaacatgttttccctcactttgcatcatatgac
cccgcgcgaatacagtcgtctgctacgcaagcagcagcagcaggtacatcacatagagctctagactgtagcattgtgaa
gaaagaagtgatactaccagaaagaccgcttagccatagtcctgtaccagtgtctttgtcattcgaaagtttcaaaggaa
gtaacagttgtacagtaaaaactgaaagtttatcatcgtcatcgtcatcaggtatttcattcagcagatcgtctacatca
tctaacgtaacaatcaagccgaagcctgtgccattaagtctttcattgccaacatctgacaatccaagtattgttccaag
cgttgtcagcggatttcctattccaagtcctaaggtgttcccgtcagctttccctcgtacacctattcatgttctcgcca
gtccggtgatcggaccaaggactccattcctccatttctggagctctttatcacccatagcaacaatgagcccgcgattg
aatgcatcgtctgcttttcaattcccatcgttcgctccaaatcacgtgactctgtcgccaatggcgatttcaagtttttc
tcaagttgaatctctggctacgccggcactgacttctctagccacgccgggtctgacgtcaccgacaagatcgatctcct
gtgtcttatga

Protein
Protein IDpfu_aug1.0_1891.1_15652.t1
Definition-
>pfu_aug1.0_1891.1_15652.t1
DKRTLKLRQFLVYDAGPWSLLLVPMANDDDDDDDDDDDDDDDDEFPYKFINIYILLSDVRQHSVSPALSDSSSRLSDDNK
RLGLSSNRNKIMDSNITLWQFLLELLVNQQHADIIQWTNTEGEFKLINAEEVARLWGLRKNKTNMNYDKLSRALRYYYDK
NIIKKVMGQKFVYKFVSFPEIVKTENKVTFKDKMASLAQTYGQHVFPHFASYDPARIQSSATQAAAAGTSHRALDCSIVK
KEVILPERPLSHSPVPVSLSFESFKGSNSCTVKTESLSSSSSSGISFSRSSTSSNVTIKPKPVPLSLSLPTSDNPSIVPS
VVSGFPIPSPKVFPSAFPRTPIHVLASPVIGPRTPFLHFWSSLSPIATMSPRLNASSAFQFPSFAPNHVTLSPMAISSFS
QVESLATPALTSLATPGLTSPTRSISCVL

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