Gene
| Gene Model ID | pfu_aug1.0_1892.1_66138 |
|---|---|
| Locus | scaffold1892.1 : 32604 ... 38505 : - |
| To GenomeBrowser | scaffold1892.1:32604..38505 |
| Genes list of scaffold | scaffold1892.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1892.1_66138.t1 | 1 | 1 | Asn_synthase | 175 | 347 | 4.6e-33 | 114.7 | 9.9e-37 | 7.3e-33 | 114.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1892.1_66138.t1 | gi|348541855|ref|XP_003458402.1| | PREDICTED: LOW QUALITY PROTEIN: asparagine synthetase domain-containing protein 1-like [Oreochromis niloticus] | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1892.1_66138.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1892.1_66138.t1 atggacagagtagacaaacagtctgtgtctgcgatgatttatccaaaccgtcctaaatctgtgaaagtcacttttgaaat agatgataattatcatgtgccgggggagattccaaagctcaatcgttccatacctgatatcagtatgcaagaagaaaagg ttgaagatcataaacgttacttggaggaaatgttaaataatactgatgggttcatgtcaaagttggcagatcagttaata gatgttctcctccaagctgtcaagggacgagtgtataatcagacgtacatgaaaactaggaactgtaacgaatgtattga ttcgtcaataagtcgtaacaatggaaattcattggctaccaacacaggccataaaataagtgatccattaaacttgacct caaggacgtctatgttagatgtaaatactgacaatacttctgtgaatcagcagctagatgttgaagaaatgatttccagt tctaagcatggtaactctgaagcagagcaaagttcacaaagtgcttttgccaacagtaaagtagccattttgttttctgg gggaattgattcagtaatgatcgctgcgcttgtggacagatgtctgccagagtgtgaacctatagatcttattaatgtgg catttgaacaacaaccaaaagggacagtaaagaagaaaaacaatgtttctttagagaggagtgaggaggacagatggaat gtaccagatagagagactggccatagggctctggcagaacttaatccaaatagaacatggaattttgtagaggtcaatgt aactttatcagaactgaaagaaataaggtctactgacattcgccatttagtttatcctttggaaacagtacttgatgaca gtataggaagtgctgtttggtttgctgccaggggacatggaattctgggtaatggaatacatactgggaaaccatacata agtaaagccaaggtaatactctgtggtatgggagcagatgagcagtttgctgggtactctaggcacagaggaaaatatca gtaa |
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Protein
| Protein ID | pfu_aug1.0_1892.1_66138.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1892.1_66138.t1 MDRVDKQSVSAMIYPNRPKSVKVTFEIDDNYHVPGEIPKLNRSIPDISMQEEKVEDHKRYLEEMLNNTDGFMSKLADQLI DVLLQAVKGRVYNQTYMKTRNCNECIDSSISRNNGNSLATNTGHKISDPLNLTSRTSMLDVNTDNTSVNQQLDVEEMISS SKHGNSEAEQSSQSAFANSKVAILFSGGIDSVMIAALVDRCLPECEPIDLINVAFEQQPKGTVKKKNNVSLERSEEDRWN VPDRETGHRALAELNPNRTWNFVEVNVTLSELKEIRSTDIRHLVYPLETVLDDSIGSAVWFAARGHGILGNGIHTGKPYI SKAKVILCGMGADEQFAGYSRHRGKYQ |
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