Gene
| Gene Model ID | pfu_aug1.0_18943.1_47264 |
|---|---|
| Locus | scaffold18943.1 : 10127 ... 13665 : - |
| To GenomeBrowser | scaffold18943.1:10127..13665 |
| Genes list of scaffold | scaffold18943.1 |
| Synonym | pfu_aug2.0_402.1_07457 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18943.1_47264.t1 | 1 | 1 | RNA_pol_Rpb2_6 | 8 | 78 | 3.3e-20 | 72.1 | 2.7e-24 | 4.0e-20 | 71.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18943.1_47264.t1 | gi|193786878|dbj|BAG52201.1| | unnamed protein product [Homo sapiens] | 5.0e-32 |
Transcript
| Transcript ID | pfu_aug1.0_18943.1_47264.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18943.1_47264.t1 atggcacagatatttatcattgcagcatttggaggggacaaagtagaagatttgtcggcagatttgattcgacatggctt taattaccttggcaaggattacgtcacttctggtgtaacaggagaacctttagaagcctacatatactttggtcccatat actatcagaagctaaagcacatggtactggacaagatgcatgcccgtgccaaaggtcccagggccgtactaacacctcgc cgggacgaaaaagtccggagagctaatgccataccctcggcgtcggcgtcattgttggttgtcgtcatccgtagacaaaa ctttaacctgggctatatctcttga |
|
Protein
| Protein ID | pfu_aug1.0_18943.1_47264.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18943.1_47264.t1 MAQIFIIAAFGGDKVEDLSADLIRHGFNYLGKDYVTSGVTGEPLEAYIYFGPIYYQKLKHMVLDKMHARAKGPRAVLTPR RDEKVRRANAIPSASASLLVVVIRRQNFNLGYIS |
|