Gene
| Gene Model ID | pfu_aug1.0_18968.1_18594 |
|---|---|
| Locus | scaffold18968.1 : 3365 ... 18162 : - |
| To GenomeBrowser | scaffold18968.1:3365..18162 |
| Genes list of scaffold | scaffold18968.1 |
| Synonym | pfu_aug2.0_426.1_20763 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_18968.1_18594.t1 | 1 | 1 | FKBP_C | 64 | 152 | 5.5e-21 | 74.3 | 7.4e-25 | 1.1e-20 | 73.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_18968.1_18594.t1 | gi|198437628|ref|XP_002128893.1| | PREDICTED: inactive peptidyl-prolyl cis-trans isomerase FKBP6 isoform X1 [Ciona intestinalis] | 1.4013e-45 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_18968.1_18594.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18968.1_18594.t1 aggagaaagcttacttcaaacctgaagacgtgctacagaatctatatatagatgacgatgaggacacagacgatgatgat gacgatgtgctgccatttacaaagatgaggaagaaaatggaggatattactcccaataaagacggaggcgtccataaaaa gatcctacaggaaggctcgggtaacgtcataccaccgggatgtatcattaccattcactttaacggttatttggagctga cagatgagccgtttgactcgtccaggttgaggaacagcccacacaagtgtagattggagggaggtggcctgatccctggg ttagagctggcagtatccacaatgaagaaaggagagctggccagggtattaatagaagccgagtacgcttacggcaaact ggggattccccctcgaatacctgaggatgctacagtgatgtttgaggtagagttactggactttgtagaacatgctggtt tagacgactatcacctaatgacagagcaagaaaaaagagatgtgtcattccaaaatattgtcaagcattatgaacaatgt aaacaagaaggtaaacagtactggaacagtgcccaatacagcaaagcattccaaaaatacaaaaaggtcagtgatatgta g |
|
Protein
| Protein ID | pfu_aug1.0_18968.1_18594.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_18968.1_18594.t1 EKAYFKPEDVLQNLYIDDDEDTDDDDDDVLPFTKMRKKMEDITPNKDGGVHKKILQEGSGNVIPPGCIITIHFNGYLELT DEPFDSSRLRNSPHKCRLEGGGLIPGLELAVSTMKKGELARVLIEAEYAYGKLGIPPRIPEDATVMFEVELLDFVEHAGL DDYHLMTEQEKRDVSFQNIVKHYEQCKQEGKQYWNSAQYSKAFQKYKKVSDM |
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