Gene
| Gene Model ID | pfu_aug1.0_189684.1_50091 |
|---|---|
| Locus | scaffold189684.1 : 1 ... 786 : - |
| To GenomeBrowser | scaffold189684.1:1..786 |
| Genes list of scaffold | scaffold189684.1 |
| Synonym | pfu_aug2.0_11.1_03409 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_189684.1_50091.t1 | 1 | 1 | G-patch | 113 | 154 | 2.3e-11 | 43.2 | 4.0e-14 | 4.9e-11 | 42.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_189684.1_50091.t1 | gi|148227576|ref|NP_001090600.1| | G patch domain and ankyrin repeats 1 [Xenopus laevis] | 9.0e-37 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_189684.1_50091.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_189684.1_50091.t1 gctgctaataatggacatatagaagtagtgaaattgcttttgagaaatggagcgagtaaacttcaatgtgacacaaaggg aagaacagcggcagctttagcagggttgaaagggcacacgagtgtcaaaacttatatcgaaaatttcaatcgtaaggatg acttgagaaaacataaacgagaattgaaacgggagatatctgatgacgagtcattttactgtcctgtttgtaaaagtaat ttcaaagagtcctctaaaaaggcacatgaagcctccaccgtgcatttattcaatatgaaactaaagcctaaagaagatcc attcgtcattccgtcgagtaacgtaggatataagctgatgatgaaaagtggatgggatggacaaaaaggccttggggccg aaagtcagggaaaacgtcatccaatcaaaactgtgttaaaaagagaccgagcttgcttagggtcggaagtacaatcatcc aaaaaagcaagagtaactcactttggaccaaacgatctgggcgcagtgaaaaagagttccatgaatctagataggaaaat gactgccaaaacactcagcaagaaagtacagaaattcagagaaaagaaagctaaaaattgggagaaaaatttaagacagt acatgaatatggactaa |
|
Protein
| Protein ID | pfu_aug1.0_189684.1_50091.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_189684.1_50091.t1 AANNGHIEVVKLLLRNGASKLQCDTKGRTAAALAGLKGHTSVKTYIENFNRKDDLRKHKRELKREISDDESFYCPVCKSN FKESSKKAHEASTVHLFNMKLKPKEDPFVIPSSNVGYKLMMKSGWDGQKGLGAESQGKRHPIKTVLKRDRACLGSEVQSS KKARVTHFGPNDLGAVKKSSMNLDRKMTAKTLSKKVQKFREKKAKNWEKNLRQYMNMD |
|